Pairwise Alignments

Query, 306 a.a., glutamate / aspartate ABC transporter - periplasmic binding protein from Pseudomonas putida KT2440

Subject, 298 a.a., Glutamate/aspartate ABC transporter, substrate-binding protein GltI (TC 3.A.1.3.4) from Variovorax sp. SCN45

 Score =  226 bits (575), Expect = 7e-64
 Identities = 127/290 (43%), Positives = 172/290 (59%), Gaps = 8/290 (2%)

Query: 11  AAIAAAVIASPAMAEELTGTLKKIKESGTITLGHRDSSIPFSYLAGKPEP-VGYSHDIQL 69
           AA+A   +A  A A+  TGTL KIK SG + LG R++S P +Y+ G  E  VGY     +
Sbjct: 9   AAVALLALAFGAAAQTATGTLDKIKTSGKVVLGVREASPPMAYMLGAGEKYVGY----HV 64

Query: 70  AVVDALKKQLGTDIKVRYNLVTSQTRIPLVQNGTVDLECGSTTNNVERQQQVGFSVGIFE 129
            + + + K +    K+ Y  VT+Q  IPLVQNGT+D+ CG TTNN+ RQQ V F++  + 
Sbjct: 65  ELCERVLKDIAPQAKLEYMAVTAQNTIPLVQNGTLDIGCGPTTNNMARQQLVAFALTTYV 124

Query: 130 VGTRLLTKVKDGQPAYKDFPDLAGKNVVTTAGTTSERILKAMNADKQMKMNVISAKDHGE 189
              R+ TKV  G         LAG+NV  + GTT+ ++L+       +    +  KDH E
Sbjct: 125 SEVRMATKVDSG---ITTLDQLAGRNVSASTGTTAVQLLRKRERSNNVSYKTVLGKDHLE 181

Query: 190 AFNMLESGRAVAFMMDDALLAGEMAKARKPADWVITGTPQSYEIYGCMVRKDDAAFKKAV 249
           +F  LESGRA AF++DD LLAG +A ++ PA + I G     E    + RKDD AFK AV
Sbjct: 182 SFLQLESGRADAFVLDDNLLAGIIANSKDPASYRIVGEALGSEPIALLFRKDDPAFKTAV 241

Query: 250 DDAIVAYFKSGEVNKSYEKWFMQPIPPKGLNLNFQMSEELKKLIAEPTDK 299
           DD++    KSGE+ K Y KWF+  IPPK  +LN  MS  LK+L+AEP DK
Sbjct: 242 DDSLRRMMKSGELEKIYTKWFVAAIPPKNTSLNLPMSATLKQLMAEPNDK 291