Pairwise Alignments

Query, 306 a.a., glutamate / aspartate ABC transporter - periplasmic binding protein from Pseudomonas putida KT2440

Subject, 341 a.a., Putative amino-acid ABC transporter-binding protein YhdW from Escherichia coli ECRC100

 Score = 76.6 bits (187), Expect = 7e-19
 Identities = 69/259 (26%), Positives = 109/259 (42%), Gaps = 8/259 (3%)

Query: 6   RQLLGAAIAAAVIASPAMAEELTGTLKKIKESGTITLGHRDSSIPFSYLAGKPEPVGYSH 65
           + ++    AA+V+ + A       TL  +++ G +  G  D    FSY     +  G   
Sbjct: 3   KMMIATLAAASVLLAVANQAHAGATLDAVQKKGFVQCGISDGLPGFSYADADGKFSGIDV 62

Query: 66  DIQLAVVDALKKQLGTDIKVRYNLVTSQTRIPLVQNGTVDLECGSTTNNVERQQQVG--F 123
           D+   V  A+    G D KV+Y  +T++ R   +Q+G VDL   +TT    R   +G  F
Sbjct: 63  DVCRGVAAAV---FGDDTKVKYTPLTAKERFTALQSGEVDLLSRNTTWTSSRDAGMGMAF 119

Query: 124 SVGIFEVGTRLLTKVKDGQPAYKDFPDLAGKNVVTTAGTTSERILKAMNADKQMKMNVIS 183
           +   +  G   LT  K G  + K+   L G  V   AGT +E  +        MK   ++
Sbjct: 120 TGVTYYDGIGFLTHDKAGLKSAKE---LDGATVCIQAGTDTELNVADYFKANNMKYTPVT 176

Query: 184 AKDHGEAFNMLESGRAVAFMMDDALLAGEMAKARKPADWVITGTPQSYEIYGCMVRKDDA 243
                E+   LESGR      D + L     K   PA+W++     S E  G +VR+ D 
Sbjct: 177 FDRSDESAKALESGRCDTLASDQSQLYALRIKLSNPAEWIVLPEVISKEPLGPVVRRGDD 236

Query: 244 AFKKAVDDAIVAYFKSGEV 262
            +   V   + A   + E+
Sbjct: 237 EWFSIVRWTLFAMLNAEEM 255