Pairwise Alignments

Query, 223 a.a., glutamate / aspartate ABC transporter - permease subunit from Pseudomonas putida KT2440

Subject, 229 a.a., Glutamate/aspartate ABC transporter, permease protein GltK (TC 3.A.1.3.4) from Variovorax sp. SCN45

 Score =  188 bits (478), Expect = 6e-53
 Identities = 99/220 (45%), Positives = 143/220 (65%), Gaps = 1/220 (0%)

Query: 2   EMDFSEIIPALPALWEGMVMTLKLMVMGVIGGIVLGTILALMRLSSSKLLSNLAGAYVNY 61
           + D++ +  A P L +G+ MT  L+   +  G+ LGT+LA+ R+ + + ++ L   YVN 
Sbjct: 4   DFDWASLQRAWPYLLQGLQMTAFLVAASMAAGMGLGTLLAITRIFAPRPVAALVAGYVNL 63

Query: 62  FRSIPLLLVITWFYLAVPFVLRWITGE-DTPVGAFTSCVVAFMMFEAAYFCEIVRAGVQS 120
           FRSIPL+L I W Y  +P VLR +TG+ +  VG   + +VAF++ E+AY+CEI+RAG+ S
Sbjct: 64  FRSIPLILTILWIYFLMPVVLRSVTGDPNLSVGPIYAALVAFVLAESAYYCEIIRAGIGS 123

Query: 121 ISKGQMGAAQALGMNYAQTMRLIILPQAFRKMTPLLLQQSIILFQDTSLVYTVGLVDFLN 180
           +  GQM AAQ+LGM+  Q MR +ILPQAFR MTP L+ Q+I L +DTSLVY + L DFL 
Sbjct: 124 VRAGQMQAAQSLGMSPWQAMRHVILPQAFRNMTPSLINQTIALLKDTSLVYVISLNDFLG 183

Query: 181 SARSNGDIIGRSHEFLIFAGVVYFLISFSASWLVKRLQKR 220
           +A   G   GR  E  I   VVY ++  + +W +  LQ+R
Sbjct: 184 AASKVGQRDGRVVEVYILVAVVYLVLCTAGAWWITWLQRR 223