Pairwise Alignments

Query, 223 a.a., glutamate / aspartate ABC transporter - permease subunit from Pseudomonas putida KT2440

Subject, 219 a.a., ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

 Score =  136 bits (343), Expect = 3e-37
 Identities = 80/223 (35%), Positives = 130/223 (58%), Gaps = 6/223 (2%)

Query: 1   MEMDFSEIIPALPALWEGMVMTLKLMVMGVIGGIVLGTILALMRLSSSKLLSNLAGAYVN 60
           ME+D++ +      L  G  +T+ L V+ ++  + LG +LALMRLSSSK LS  +  +V 
Sbjct: 1   MELDWNIVWTHRYDLLHGAGLTVLLTVLTMLVAVPLGIVLALMRLSSSKALSGASQVFVE 60

Query: 61  YFRSIPLLLVITWFYLAVPFVLRWITGEDTPVGAFTSCVVAFMMFEAAYFCEIVRAGVQS 120
           +FR++PL+LV+ W +  +P ++           AFT+ +VA  +  +AY  E  RAG+ S
Sbjct: 61  FFRNLPLILVVYWAFYVMPVLMH------IEFSAFTTGLVALCLNVSAYNAETFRAGINS 114

Query: 121 ISKGQMGAAQALGMNYAQTMRLIILPQAFRKMTPLLLQQSIILFQDTSLVYTVGLVDFLN 180
           I KGQM AA A+GM+  Q M+ +++PQA+R++ P+L    + LF+DTSLV  + + +  +
Sbjct: 115 IRKGQMEAAIAMGMSRWQAMKKVVIPQAWRRVLPVLASTWVSLFKDTSLVSVIAVGELAH 174

Query: 181 SARSNGDIIGRSHEFLIFAGVVYFLISFSASWLVKRLQKRISV 223
            A        R  E L    V+Y+L+ +  + LV  +QK+  V
Sbjct: 175 VALQIRSSSFRVLEMLTAMAVIYWLMGYPQAKLVDWIQKKFEV 217