Pairwise Alignments

Query, 223 a.a., glutamate / aspartate ABC transporter - permease subunit from Pseudomonas putida KT2440

Subject, 311 a.a., Inner membrane amino-acid ABC transporter permease protein YhdY from Azospirillum sp. SherDot2

 Score =  136 bits (343), Expect = 4e-37
 Identities = 87/222 (39%), Positives = 128/222 (57%), Gaps = 20/222 (9%)

Query: 10  PALPA-LWEGMVMTLKLMVMGVIGGIVLGTILALMRLSSSKLLSNLAGAYVNYFRSIPLL 68
           PA+P   W G+ ++L L V+G++G   L  +LAL R SS   +  LA  ++   R +PL+
Sbjct: 98  PAVPTERWSGLPVSLLLAVVGLVGAFPLAVLLALARRSSMGGVRTLAVLFIEVTRGVPLI 157

Query: 69  LVITWFYLAVPFVLRWITGEDTPVGA----FTSCVVAFMMFEAAYFCEIVRAGVQSISKG 124
            V+    L +P +L        P GA         +A ++F +AY  EIVRAG+QSI  G
Sbjct: 158 AVLYVATLLLPLML--------PAGAAIDKLLRAQIAIVLFVSAYLAEIVRAGLQSIPAG 209

Query: 125 QMGAAQALGMNYAQTMRLIILPQAFRKMTPLLLQQSIILFQDTSLVYTVGLVDFLNSARS 184
           Q  AAQALG+ Y Q+MRL+ILPQA R + P ++  +I LFQDT+L+  +GL D LN+AR+
Sbjct: 210 QYEAAQALGIGYWQSMRLVILPQALRTVIPSIVTLAIGLFQDTTLIIVIGLFDLLNTART 269

Query: 185 ---NGDIIGRSHEFLIFAGVVYFLISFSAS----WLVKRLQK 219
              +   +G   E   FA ++Y  +   AS    WL +RL++
Sbjct: 270 AAKDPAWLGFYDEAFGFAALIYLTVCVIASRYSLWLERRLRR 311