Pairwise Alignments

Query, 256 a.a., glutamate / aspartate ABC transporter - ATP binding subunit from Pseudomonas putida KT2440

Subject, 263 a.a., ABC transporter, ATP-binding protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

 Score =  283 bits (723), Expect = 3e-81
 Identities = 151/257 (58%), Positives = 182/257 (70%), Gaps = 4/257 (1%)

Query: 2   AGQAPAKKDLRMISIKNVNKWYGDFQVLTDCSTEVKKGEVVVVCGPSGSGKSTLIKCVNA 61
           AG+    KD  MI   ++NKWYGD+Q L D + EVKKGEVVVVCGPSGSGKSTLI+ VN 
Sbjct: 9   AGRPLPPKDDTMILFSDINKWYGDYQALADINAEVKKGEVVVVCGPSGSGKSTLIRTVNR 68

Query: 62  LEPFQKGDIVVDGTSIADPKTN--LPKLRSRVGMVFQHFELFPHLTITENLTIAQRKVLG 119
           LE  + G ++ DG  I  P  +  L +LRSR+G VFQ F LFPHL++ EN+ ++  +VLG
Sbjct: 69  LEEVKSGQLLFDGHDIHAPMGSAALNRLRSRIGFVFQSFNLFPHLSVLENIMLSPMRVLG 128

Query: 120 RSEAEATKKGLALLDRVGLSAHAKKHPGQLSGGQQQRVAIARALAMDPIVMLFDEPTSAL 179
              A+A  K   LL+RVGLS+ A  +P QLSGGQQQRVAIARALAM+P  MLFDEPTSAL
Sbjct: 129 VKRADAKTKAGQLLERVGLSSKAGAYPAQLSGGQQQRVAIARALAMEPPAMLFDEPTSAL 188

Query: 180 DPEMVSEVLDVMVQLAQEGMTMMCVTHEMGFARKVANRVIFMDKGSIIEDCTKEEFFGDQ 239
           DPEMV EVL VM  LA +GMTMMCVTHEM FAR+VA+R+ FMD G I+E    E FF  +
Sbjct: 189 DPEMVGEVLSVMRGLAHDGMTMMCVTHEMNFAREVADRIWFMDAGRILEKADPETFF--R 246

Query: 240 SARDQRTQHLLSKILQH 256
           S +  R Q  LS +  H
Sbjct: 247 SPQHPRAQRFLSDLRAH 263