Pairwise Alignments

Query, 256 a.a., glutamate / aspartate ABC transporter - ATP binding subunit from Pseudomonas putida KT2440

Subject, 260 a.a., ABC transporter, ATP-binding protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

 Score =  275 bits (703), Expect = 7e-79
 Identities = 144/253 (56%), Positives = 180/253 (71%), Gaps = 3/253 (1%)

Query: 2   AGQAPAKKDLRMISIKNVNKWYGDFQVLTDCSTEVKKGEVVVVCGPSGSGKSTLIKCVNA 61
           A  A  + +L +I +  V KWYGDFQVL D   EV++GE +V+CGPSGSGKSTL++C+N 
Sbjct: 10  ASNADGRAEL-VIRMVGVQKWYGDFQVLRDIDLEVQRGERIVICGPSGSGKSTLLRCINR 68

Query: 62  LEPFQKGDIVVDGTSIADPKTNLPKLRSRVGMVFQHFELFPHLTITENLTIAQRKVLGRS 121
           LE  Q+G IVV+   +      +  +R  VGMVFQHF LFPHLTI EN T+A       S
Sbjct: 69  LEEHQQGQIVVNRAELTADMRRIDAVRRDVGMVFQHFNLFPHLTILENCTLAPVWSKKYS 128

Query: 122 EAEATKKGLALLDRVGLSAHAKKHPGQLSGGQQQRVAIARALAMDPIVMLFDEPTSALDP 181
             EA +  ++ L+RV +   A K+P QLSGGQQQRVAIARAL M P VMLFDEPTSALDP
Sbjct: 129 PKEAKEVAMSYLERVRIPEQANKYPSQLSGGQQQRVAIARALCMGPKVMLFDEPTSALDP 188

Query: 182 EMVSEVLDVMVQLAQEGMTMMCVTHEMGFARKVANRVIFMDKGSIIEDCTKEEFFGDQSA 241
           EMV EVLD MV LA +GMTM+ VTHEM FAR+VANRVIFMD+G+I+E    +EFFG  + 
Sbjct: 189 EMVKEVLDTMVSLADDGMTMLSVTHEMNFARQVANRVIFMDRGAIVEQAPPQEFFG--NP 246

Query: 242 RDQRTQHLLSKIL 254
           + +RT+  LS++L
Sbjct: 247 KHERTRLFLSQLL 259