Pairwise Alignments

Query, 442 a.a., C4-dicarboxylate transport transcriptional regulatory protein from Pseudomonas putida KT2440

Subject, 453 a.a., Two component, Sigma-54 Specific, central transcriptional regulator of acidic amino acid uptake from Variovorax sp. SCN45

 Score =  446 bits (1147), Expect = e-130
 Identities = 234/441 (53%), Positives = 303/441 (68%), Gaps = 5/441 (1%)

Query: 6   LTVLIVEDDPHVLLGCQQALALEDIACEGVGSAEQALERIGDDFAGIVVSDIRLPGIDGL 65
           + VL+VEDD  V L   Q L L     E   SAE+A   I      IV+SD+RLPG+ G 
Sbjct: 7   IRVLLVEDDEDVRLSTTQVLTLAGFEVEAFASAERARAHISFGVPAIVISDVRLPGMSGT 66

Query: 66  ELLNRLKARDRSLPVVLITGHGDIDMAVGAMRNGAYDFMEKPFSPERLVDVVRRALEQRG 125
           E L  L   D  LPV+L+TGHG I MAV AMR GAYDF+EKPFS ERLV +VR A+E+R 
Sbjct: 67  EWLGELHTADAELPVILVTGHGHIAMAVQAMREGAYDFIEKPFSSERLVAIVRHAIERRQ 126

Query: 126 LSREVVALRRQLAEQSSLEGRIIGRSPAMEHLRELIANVADTSANVLIEGETGTGKELVA 185
           L+ +V  LR  L   + ++  +IGRS  M+ +R  +  +A+TSA+VLI GETGTGKELVA
Sbjct: 127 LTLQVRTLRDALENWNGIQSVLIGRSAQMQQVRRTVMTLAETSADVLIYGETGTGKELVA 186

Query: 186 RCLHDFSRRQSHPFVALNCGGLPENLFESEIFGHEANAFTGAGKRRIGKIEHANGGTLFL 245
           +CLH  S R+   FV LNCGGLPE L ESE+FGHEA AFT A + R+GK E+ANGGTLFL
Sbjct: 187 QCLHAHSERRRRHFVPLNCGGLPEALAESELFGHEAGAFTSANRARVGKFEYANGGTLFL 246

Query: 246 DEVESMPINLQIKLLRVLQERTLERLGSNQSIPVDCRVIAATKADLDALGQSGQFRSDLY 305
           DE+ESMP+ +QIKLLR LQER++ER+GSN++IP DCRV+AA+K DL  +    +FR+DLY
Sbjct: 247 DEIESMPMPVQIKLLRALQERSIERIGSNKAIPFDCRVVAASKEDLKEMSDRQKFRADLY 306

Query: 306 YRLNVVTLELPPLRERREDILQLFEHFLQQSALRFDRETPTLDSQTLSRLMAHDWPGNVR 365
           YRL V  +ELPPLRERREDI  LFEHF   +A R++R    L +  L+ LMA+ WPGNVR
Sbjct: 307 YRLGVAFIELPPLRERREDIPLLFEHFTLLAANRYERAAQPLTNAQLADLMAYAWPGNVR 366

Query: 366 ELRNVAERYALGLPAFKKGPSGGANQGL-----LFAEAVEAFERNLLTDALQRTGGNLSQ 420
           ELRNVA+R+ LGL   +   + G  +GL        + VEAFER ++ +AL++  G+   
Sbjct: 367 ELRNVADRFVLGLLGERLTQTRGTGEGLPALPRALPQQVEAFERAVIVEALRKHKGDQPA 426

Query: 421 ASQELGMAKTTLFDKVKKYGL 441
            +  L +A+ TL DK++K+ +
Sbjct: 427 TAAALAIARQTLHDKLRKFDI 447