Pairwise Alignments

Query, 305 a.a., DNA-binding transcriptional regulator, homocysteine-binding from Pseudomonas putida KT2440

Subject, 296 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

 Score = 86.7 bits (213), Expect = 6e-22
 Identities = 77/251 (30%), Positives = 114/251 (45%), Gaps = 12/251 (4%)

Query: 1   MLEIRHLKTLHALREADSLVEAAERLHLTQSALSHQFKELEERLGLPIFVRKTKPIRFTS 60
           M+  R L+    + ++ S   AAERL + QSALS Q KELE +L  P+F R  +  R T+
Sbjct: 1   MISTRQLRYFVEIADSGSFSAAAERLFVAQSALSRQIKELETQLQTPLFERTARQPRLTA 60

Query: 61  AGLRLLQLADATLPLLRSAERDIARLAGGTAGRLHMAIECHSCFQWLMPTIDQFRDAW-- 118
           AG      A   L  L  A     ++  G  G L ++   HS    +   + Q    W  
Sbjct: 61  AGEAFYPRARNLLSELLKASEMATQVGNGERGTLRLS---HSSTVPMSGPLLQGISTWLE 117

Query: 119 --PEVELDLASGFAFAPLPALARGDLDLVVTSDPV--DLAGITYVPLFTYEAMLAVANQH 174
             P V +D+    + A L  +A G LD+ +   PV     G+  VPL++ + +LAV   H
Sbjct: 118 RCPGVSMDIVKLSSEAQLEQIADGRLDVGLLRLPVLRQREGVRVVPLYSEQLLLAVPPNH 177

Query: 175 PLA-SKPYIVPQDLLDQTLITYP-VERDRLDIFTRFL-EPADIEPAAVRTSELTVMMMQL 231
            LA S   I  + L D+  I+ P  +R  L   +  L   A   P A R        +QL
Sbjct: 178 ALARSHSPIALEQLKDEAFISIPHPQRGGLSYLSAELCMRAGFFPKAARVMSRKTTQLQL 237

Query: 232 VASGRGVCGMP 242
           + +G G+  +P
Sbjct: 238 IQAGFGIALLP 248