Pairwise Alignments

Query, 305 a.a., DNA-binding transcriptional regulator, homocysteine-binding from Pseudomonas putida KT2440

Subject, 297 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

 Score = 83.2 bits (204), Expect = 7e-21
 Identities = 73/245 (29%), Positives = 110/245 (44%), Gaps = 9/245 (3%)

Query: 1   MLEIRHLKTLHALREADSLVEAAERLHLTQSALSHQFKELEERLGLPIFVRKTKPIRFTS 60
           M+++R L+    + E + +  AAERLH++QS LS Q  +LEERLGL +F R  + IR T 
Sbjct: 1   MIDLRQLRYFEVVAEEEHVGRAAERLHISQSPLSRQIAQLEERLGLTLFERSQQRIRLTR 60

Query: 61  AGLRLLQLADATLPLLRSAERDIARLAGGTAGRLHMAIECHSCFQWLMP-TIDQFRDAWP 119
            G   L    A L      E    RL  G  G L +    ++    ++P  +   RD  P
Sbjct: 61  DGQTFLAETKALLTHANRLESLGRRLGRGEEGGLCIGYIENAMHAGVLPNALRVLRDDRP 120

Query: 120 EVELDLASGFAFAPLPALARGDLDLVVTSDP--VDLAGITYVPLFTYEAMLAVANQHPLA 177
            V + L +  +   L  L +  LD+ +  +P   D   +    +     +LA+   HPLA
Sbjct: 121 TVHIKLYNLPSLEQLEGLRQRSLDIALVGEPPAADDPDLIARQVLDDPMLLALPEHHPLA 180

Query: 178 SKPYIVPQDLLDQTLITYPVER----DRLDIFTRFLEPADIEPAAVRTSELTVMMMQLVA 233
            +  ++P+ L DQ  I   V+R    +  D F      A   P     +      + LVA
Sbjct: 181 RQSELLPEHLADQEWI--GVQRKPGANPADDFVAACIRAGFTPQIPMEAGEPFTALGLVA 238

Query: 234 SGRGV 238
           SG GV
Sbjct: 239 SGLGV 243