Pairwise Alignments

Query, 305 a.a., DNA-binding transcriptional regulator, homocysteine-binding from Pseudomonas putida KT2440

Subject, 300 a.a., Transcriptional regulator, LysR family from Pseudomonas putida KT2440

 Score = 84.0 bits (206), Expect = 4e-21
 Identities = 57/248 (22%), Positives = 115/248 (46%), Gaps = 8/248 (3%)

Query: 2   LEIRHLKTLHALREADSLVEAAERLHLTQSALSHQFKELEERLGLPIFVRKTKPIRFTSA 61
           +++R +KT   + E      AA RL + Q A++ Q + LE +LG+P+ +R T+ ++ T A
Sbjct: 1   MDLRQIKTFVVVAEELHFGRAAARLQIAQPAVTAQIQALERQLGVPLLIRSTRRVQLTEA 60

Query: 62  GLRLLQLADATLPLLRSAERD---IARLAGGTAGRLHMAIECHSCFQWLMPTIDQFRDAW 118
           G   +      + +LR  +R       +AG    ++ +     + F  L   + +    +
Sbjct: 61  G---MIFNSRCIDILRDIDRTCLATQAVAGKDLHQITIGTIYPATFGVLPNFVSRINQRF 117

Query: 119 PEVELDLASGFAFAPLPALARGDLDLVVTSDPVDLAGITYVPLFTYEAMLAVANQHPLAS 178
           PE  + + +G     +  + RG+++L       ++  + +  +   + +LA+A ++PL+S
Sbjct: 118 PEARIHIHNGNTVGIVREIERGNINLGFIRPVENIGSLRWQSIHREKYLLAIARENPLSS 177

Query: 179 KPYIVPQDLLDQTLITY--PVERDRLDIFTRFLEPADIEPAAVRTSELTVMMMQLVASGR 236
           K  + P DL  Q +I +         D F    +  D+    V +   T  M+ ++ +G 
Sbjct: 178 KSTVTPDDLRKQKIIAFSRAYNSQTDDNFPEEFKKYDLNQQVVYSCNDTQAMLAMITAGI 237

Query: 237 GVCGMPHW 244
           GV  +P W
Sbjct: 238 GVGFVPEW 245