Pairwise Alignments

Query, 305 a.a., DNA-binding transcriptional regulator, homocysteine-binding from Pseudomonas putida KT2440

Subject, 306 a.a., Transcriptional activator MetR from Pseudomonas sp. S08-1

 Score =  541 bits (1394), Expect = e-159
 Identities = 269/305 (88%), Positives = 287/305 (94%)

Query: 1   MLEIRHLKTLHALREADSLVEAAERLHLTQSALSHQFKELEERLGLPIFVRKTKPIRFTS 60
           MLE+RHLKTLHALRE DSLVEAAERLHLTQSALSHQFKELEERLG+ +FVRKTKP+RFTS
Sbjct: 1   MLELRHLKTLHALRETDSLVEAAERLHLTQSALSHQFKELEERLGMQLFVRKTKPVRFTS 60

Query: 61  AGLRLLQLADATLPLLRSAERDIARLAGGTAGRLHMAIECHSCFQWLMPTIDQFRDAWPE 120
           AGLRLLQLAD+ LP LR+AERD+ARLAGGTAGRLHMAIECHSCFQWLMPTIDQFRDAWPE
Sbjct: 61  AGLRLLQLADSLLPQLRAAERDMARLAGGTAGRLHMAIECHSCFQWLMPTIDQFRDAWPE 120

Query: 121 VELDLASGFAFAPLPALARGDLDLVVTSDPVDLAGITYVPLFTYEAMLAVANQHPLASKP 180
           VELDLASGF+FAPLPALARGDLDLVVTSDPVDL GITYVPLFTYEA LAVANQHPLAS+ 
Sbjct: 121 VELDLASGFSFAPLPALARGDLDLVVTSDPVDLPGITYVPLFTYEAQLAVANQHPLASRS 180

Query: 181 YIVPQDLLDQTLITYPVERDRLDIFTRFLEPADIEPAAVRTSELTVMMMQLVASGRGVCG 240
           YIV +DL  +TLITYPVERDRLDIFTRFLEPAD+EPA VRTSELTVMMMQLVASGRGVC 
Sbjct: 181 YIVAEDLEKETLITYPVERDRLDIFTRFLEPADVEPAQVRTSELTVMMMQLVASGRGVCS 240

Query: 241 MPHWALHEYSSRGYVKGKRLGEKGLFATLYAAVRTDMLDAPYMRDFLLTAKDTSFATLDG 300
           +P+WALHEYSSRGYV  KRLGE+GLFATL A +R+DMLDAP+MRDFLLTAKDTSFATL G
Sbjct: 241 LPNWALHEYSSRGYVTAKRLGERGLFATLQAGIRSDMLDAPFMRDFLLTAKDTSFATLAG 300

Query: 301 VSAVR 305
           VSA R
Sbjct: 301 VSAAR 305