Pairwise Alignments

Query, 305 a.a., DNA-binding transcriptional regulator, homocysteine-binding from Pseudomonas putida KT2440

Subject, 303 a.a., hypothetical protein from Pseudomonas sp. S08-1

 Score = 94.0 bits (232), Expect = 4e-24
 Identities = 63/223 (28%), Positives = 115/223 (51%), Gaps = 10/223 (4%)

Query: 2   LEIRHLKTLHALREADSLVEAAERLHLTQSALSHQFKELEERLGLPIFVRKTKPIRFTSA 61
           +++  L+ + A+ E+ S+ EA+  LH++Q ALS   KELE  LG+P+ +R  + I  T  
Sbjct: 1   MKLHQLRAMLAISESGSIQEASRLLHISQPALSKGIKELEAELGVPLLIRSNRGITVTEY 60

Query: 62  GLRLLQLADATLPLLRSAERDIARLAGGTAGRLHMAIECHSCFQWLMPTIDQFRDAWPEV 121
           G RL++ A   L  +R A  +I  L G   G++ + +   +     + +++++R  +P+V
Sbjct: 61  GERLVRRARLILEEVRRAREEIETLKGVMDGKVSIGVSPVTPGAQFIASLNRYRKRYPKV 120

Query: 122 ELDLASGFAFAPLPALARGDLDLVVTSDPV--DLAGITYVPLFTYEAMLAVANQHPLASK 179
           ++ +        +  L  G LDLV+TS P   +  G  +  L+    +LAV   HPL+  
Sbjct: 121 QVQIHELRPSKLMEGLREGQLDLVLTSLPAVRNSDGFHWTELYAQPTVLAVRKGHPLSGA 180

Query: 180 PYI--------VPQDLLDQTLITYPVERDRLDIFTRFLEPADI 214
             +        + QD L+Q+ +    E+ R++  TR +E A +
Sbjct: 181 RSLEELRDQEWLLQDSLEQSRVGLMFEQYRVEPPTRVIECASV 223