Pairwise Alignments

Query, 305 a.a., DNA-binding transcriptional regulator, homocysteine-binding from Pseudomonas putida KT2440

Subject, 303 a.a., LysR family transcriptional regulator YnfL from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score = 90.9 bits (224), Expect = 3e-23
 Identities = 73/247 (29%), Positives = 117/247 (47%), Gaps = 7/247 (2%)

Query: 2   LEIRHLKTLHALREADSLVEAAERLHLTQSALSHQFKELEERLGLPIFVRKTKPIRFTSA 61
           LE+RHL+   A+ E  +   AAERL++ Q  LS Q + LEE LG+ +F R  K +  T +
Sbjct: 1   LELRHLRYFVAVAEELNFTRAAERLYIAQPPLSTQIRALEEELGVQLFERDKKRVYLTQS 60

Query: 62  GLRLLQLADATLPLLRSAERDIARLAGGTAGRLHMAIECHSCFQWLMP-TIDQFRDAWPE 120
           G   L+ A   L  ++ A+ +  R A G  G+L +     S     +P  I +++   P 
Sbjct: 61  GRYFLERARGILASVQDAKDEAHRAATGDVGKLSIGFTASSILTQALPQAIRRYQSIHPS 120

Query: 121 VELDLASGFAFAPLPALARGDLDLVVTSDP-VDL-AGITYVPLFTYEAMLAVANQHPLAS 178
           VEL +    +   L A+    LDL V   P V +  G+     ++   + A+  QH L  
Sbjct: 121 VELKMMELASMHQLDAIHHRSLDLGVLRKPNVGVPTGVVIEEWYSAPLVAAMPQQHVLTK 180

Query: 179 KPYIVPQDLLDQTLITYPVERDRLDIFTRFLE---PADIEPAAVRTSELTVMMMQLVASG 235
              I   +L +  LI YP +   + ++ + ++    A   PA +  +     M+ LVASG
Sbjct: 181 GKGIHIGELKNVPLIVYPRDAG-IGLYWKVMDLCAKAGFRPAVMHEARDASTMIGLVASG 239

Query: 236 RGVCGMP 242
            GV  +P
Sbjct: 240 LGVAIVP 246