Pairwise Alignments

Query, 305 a.a., DNA-binding transcriptional regulator, homocysteine-binding from Pseudomonas putida KT2440

Subject, 317 a.a., HTH-type transcriptional regulator MetR from Escherichia coli ECOR38

 Score =  270 bits (691), Expect = 2e-77
 Identities = 137/292 (46%), Positives = 193/292 (66%), Gaps = 5/292 (1%)

Query: 1   MLEIRHLKTLHALREADSLVEAAERLHLTQSALSHQFKELEERLGLPIFVRKTKPIRFTS 60
           M+E++HLKTL ALR   SL  AA  LH TQSALSHQF +LE+RLG  +FVRK++P+RFT 
Sbjct: 1   MIEVKHLKTLQALRNCGSLAAAAATLHQTQSALSHQFSDLEQRLGFRLFVRKSQPLRFTP 60

Query: 61  AGLRLLQLADATLPLLRSAERDIARLAGGTAGRLHMAIECHSCFQWLMPTIDQFRDAWPE 120
            G  LLQLA+  LP +  A   +         RL +AIECHSC QWL P ++ F   WP+
Sbjct: 61  QGEILLQLANQVLPQISQA---LQACNEPQQTRLRIAIECHSCIQWLTPALENFHKNWPQ 117

Query: 121 VELDLASGFAFAPLPALARGDLDLVVTSDPVDLAGITYVPLFTYEAMLAVANQHPLASKP 180
           VE+D  SG  F P PAL +G+LDLV+TSD +  +G+ Y P+F YE  L +A  HPLA+K 
Sbjct: 118 VEMDFKSGVTFDPQPALQQGELDLVMTSDILPRSGLHYSPMFDYEVRLVLAPDHPLAAKT 177

Query: 181 YIVPQDLLDQTLITYPVERDRLDIFTRFLEPADIEPAAVRTSELTVMMMQLVASGRGVCG 240
            I P+DL  +TL+ YPV+R RLD++  FL+PA + P ++++ + T++++Q+VA+  G+  
Sbjct: 178 RITPEDLASETLLIYPVQRSRLDVWRHFLQPAGVSP-SLKSVDNTLLLIQMVAARMGIAA 236

Query: 241 MPHWALHEYSSRGYVKGKRLGEKGLFATLYAAVRTDMLDAPYMRDFLLTAKD 292
           +PHW +  +  +G V  K LGE GL++ LYAAVR      P    F+ +A++
Sbjct: 237 LPHWVVESFERQGLVVTKTLGE-GLWSRLYAAVRDGEQRQPITEAFIRSARN 287