Pairwise Alignments

Query, 1434 a.a., putative ATP-dependent DNA helicase lhr from Pseudomonas putida KT2440

Subject, 826 a.a., ligase-associated DNA damage response DEXH box helicase from Pseudomonas fluorescens SBW25

 Score =  214 bits (546), Expect = 2e-59
 Identities = 185/576 (32%), Positives = 263/576 (45%), Gaps = 53/576 (9%)

Query: 33  QAQAWPLIHAGQSMLLAAPTGSGKTLSAFLAVLDE--LLREGMKHQGELPAQTL-VIYVS 89
           Q   W  +  G+S LL A TG+GKT + + A L+   L R  +  + + PA+ L V++++
Sbjct: 23  QKDVWAAVKDGRSGLLHASTGAGKTYALWFAALNRFALTRPPVTGKRKPPAEPLTVLWIT 82

Query: 90  PLKALSNDIRLNLQAPLEGISQAIAEQGLNAPRITTAVRTGDTPQKERAAMRKLAPHILV 149
           P++AL+ D    L+APLE          L  P  +  +RTGDT   ERA   +  P  LV
Sbjct: 83  PMRALAADTARALEAPLEA---------LQIPW-SIGLRTGDTSSSERARQTRRQPTALV 132

Query: 150 TTPESLYVLMGSASGREGLAHVHTVIVDEIHALAGNKRGAHLALTLERLQALCKKPLRRI 209
           TTPESL +++  A     LAH+  V+VDE H L GNKRG  L L L RL+    + L   
Sbjct: 133 TTPESLTLMLARADSEASLAHLRMVVVDEWHELIGNKRGVQLQLALARLRRWHPE-LMVW 191

Query: 210 GLSATQRPVERVAQFLVGSGRPCAIVDIGHARKR-DLAIEVPPVPLGAVMAIDVWGLVYD 268
           G+SAT        + LV  G    +   G   KR ++   +PPV      A  +   +  
Sbjct: 192 GISATLGNQPHALEVLVPQGGGINVQ--GQTVKRLEVDTLLPPVAERFPWAGHIGLKMLP 249

Query: 269 RLATLAREHRTTLVFVNTRRLAERITRHLSDRLGKEA--VAAHHGSLSKALRLDAEQRLK 326
           ++       R+ LVF NTR  +E   + L D     A  +A HHGSLS+  R   E+ LK
Sbjct: 250 QVVAEVDASRSCLVFTNTRAQSEIWYQALLDARPDWAGVIALHHGSLSRETRDWVERALK 309

Query: 327 SGQLQVLVATASLELGIDIGDIDLVCQVASPGSIAAFLQRVGRAGHQVDGVPKGRLFPTS 386
            GQL+ +V T+SL+LG+D   ++ V Q+ S   +A  +QR GR+GH      +  L PT 
Sbjct: 310 DGQLKAVVCTSSLDLGVDFLPVERVLQIGSAKGVARLMQRAGRSGHAPGRPSRVTLVPTH 369

Query: 387 RDDLIECVALLDCVRQGELDALHIPRAPLDVLAQQIVAEASNQAWHEQELLDCLRQATPY 446
             +L+E  A  D + Q  ++A   P  PLDVL Q +V+ A    +    LL  +R A  Y
Sbjct: 370 SLELVEAAAAQDAIAQRRIEARESPHKPLDVLVQHLVSMALGGGFTPDALLTEVRGAWAY 429

Query: 447 AELDQHHYQALLRMLAEG------YNGRQGV-------------RSAYLHRDAVSGTLRG 487
            EL    +   L  +  G      Y   + V             R A  HR +V GT+  
Sbjct: 430 RELTDADWAWALGFVRHGGLSLTAYPDYRRVEPDEHGIWRVPDARLARRHRMSV-GTIVS 488

Query: 488 RRGSQLTALTSGGTIPDNADYAVLLEPQALNIGSVNEDFAVESIAGDIFQLGNASYRILR 547
                L   + GG                 N+GSV E F      GD F        ++R
Sbjct: 489 DASIHLKYWSKGG--------------GGKNLGSVEEGFIARLKPGDGFLFAGRLLELVR 534

Query: 548 VEPGRVRVEDAHGLPPTIPFWLGEAPGRSDELSAAV 583
           VE     V  +      +P W G     S+EL+ AV
Sbjct: 535 VENMTAYVRRSTAKKAAVPRWNGGRMPLSNELAQAV 570