Pairwise Alignments

Query, 400 a.a., putative protein secretion protein for export from Pseudomonas putida KT2440

Subject, 402 a.a., type II secretion system protein F from Pseudomonas simiae WCS417

 Score =  184 bits (468), Expect = 3e-51
 Identities = 133/397 (33%), Positives = 204/397 (51%), Gaps = 12/397 (3%)

Query: 4   YRYQAVDLAGKSHKASLQADSERHARQLLREQGLFARQLQRHDAGSRQPRRQRLSRAQLC 63
           Y ++ ++  G+         +    +  LR+QG+    + R  +         ++   + 
Sbjct: 8   YAWEGINRKGRRVSGQTTGHNPALVKAQLRKQGICPGHV-RKKSPVLSSLAASITSTDIT 66

Query: 64  ELTRQLATLTGAGIPLVDALATLERQLRQPALHSVLVALRGSLAEGLGLARSLARQGAPF 123
             TRQLATL  AGIPL+ A   +       AL   +  L+ ++  G  LA +L +Q   F
Sbjct: 67  LFTRQLATLLKAGIPLLQAFDIIAEGFDNRALRERVQGLKQAIEAGTSLAEALRKQPRCF 126

Query: 124 TGLYCALVEAGERSGHLAQVLTRLADHLEQVQRQQHKARTALIYPAVLMGVSLAVVIGLM 183
             LYC LV AGE++G L  +L R+A H E+ ++ + + + A+ YP  ++ V+  V   L+
Sbjct: 127 DELYCNLVAAGEQAGALETLLERVAIHREKSEQLKTRIKKAMTYPITVLVVASLVTGVLL 186

Query: 184 TFVVPKLTEQFAHAGQSLPLITSLLIGLSQGLVHAGPWLLGVALLLGGLAGWL-LRKPH- 241
             VVP+    FA     LP  T  +IGLS+ +  A  W    A+ LGGLAG L LR+ + 
Sbjct: 187 VHVVPQFQNLFAGVDGKLPGFTLQVIGLSEFMQKAW-W----AVALGGLAGGLGLREAYR 241

Query: 242 ----WCLRRDQLLLRLPRIGNLLQVLESARLARSLAILCGSGVALLEALQVATETIGNRR 297
               + L  D  LL+ P  G LL     AR AR+L+    +GV LL+AL       G+  
Sbjct: 242 RLADFRLWLDSCLLKAPVAGKLLSKSAVARFARTLSTTFAAGVPLLQALDSVAGAAGSGP 301

Query: 298 IRLAMEQVRQHVQGGTSLHRALDASQQFPPLLVNMVGSGEASGTLADMLERVADDQERGF 357
            R A+EQ+R+ V  G  L++++  S  FP + + M   GE SGTL  MLE+VA+  E   
Sbjct: 302 FRRAIEQMRRDVATGMPLNQSMLTSGLFPGMAIQMTAIGEESGTLDRMLEKVANHYEADV 361

Query: 358 ARQVDTAMALFEPLMILVMGAVVLFIVLAVLLPIMQL 394
              VD    L EPL+++V+G +V  +V+A+ LP+ QL
Sbjct: 362 DNLVDHLTHLMEPLIMVVLGGIVGALVIAMYLPVFQL 398