Pairwise Alignments

Query, 400 a.a., putative protein secretion protein for export from Pseudomonas putida KT2440

Subject, 411 a.a., type II secretion system inner membrane protein GspF from Variovorax sp. OAS795

 Score =  236 bits (603), Expect = 7e-67
 Identities = 151/408 (37%), Positives = 227/408 (55%), Gaps = 12/408 (2%)

Query: 1   MPTYRYQAVDLAGKSHKASLQADSERHARQLLREQGLFARQLQR------HDAGSRQPRR 54
           MP Y ++A+D +G+S +  L+AD+ R AR LLR Q L    +        +  GS   RR
Sbjct: 1   MPAYSFEAIDASGQSREGVLEADTARSARSLLRAQALIPLSVTPVGSNHVNGTGSGGLRR 60

Query: 55  ------QRLSRAQLCELTRQLATLTGAGIPLVDALATLERQLRQPALHSVLVALRGSLAE 108
                 +  S   L   TRQLA L  +G+PL  AL  L  +       +++ +LR  +  
Sbjct: 61  WLGGGARIFSSTGLAVWTRQLAGLVSSGLPLERALTALTDEAETEPQRNLVASLRAEVNA 120

Query: 109 GLGLARSLARQGAPFTGLYCALVEAGERSGHLAQVLTRLADHLEQVQRQQHKARTALIYP 168
           G   AR+LA     F+ +Y A++ AGE+SG+L  VL RLAD LE+ Q  Q K   A +YP
Sbjct: 121 GSPFARALAAHPREFSPIYTAVIGAGEQSGNLGLVLDRLADDLEERQALQQKLIGAALYP 180

Query: 169 AVLMGVSLAVVIGLMTFVVPKLTEQFAHAGQSLPLITSLLIGLSQGLVHAGPWLLGVALL 228
           A++  V++ +VI L+++VVP++ + FA   +SLP +T+ ++ LS  +   G W+LG  + 
Sbjct: 181 AIVTLVAIVIVIFLVSYVVPQVAQVFAGTKRSLPFLTTAMLSLSAAVRSYGWWMLGGLVA 240

Query: 229 LGGLAGWLLRKPHWCLRRDQLLLRLPRIGNLLQVLESARLARSLAILCGSGVALLEALQV 288
           +       L +  + L+ D   L+LP +G L +   +AR A +LA+L  +GV +L ALQ 
Sbjct: 241 VAVGVRLALAQEAFRLKFDAAWLKLPLVGKLARGYNAARFASTLAMLATAGVPILRALQA 300

Query: 289 ATETIGNRRIRLAMEQVRQHVQGGTSLHRALDASQQFPPLLVNMVGSGEASGTLADMLER 348
           A+ET+GNR +R         V+ G  L  AL   ++FP L+      GE +GTL  ML+R
Sbjct: 301 ASETLGNRAMRADALDALVLVREGAPLASALAQKKRFPGLVSMFARLGEQTGTLPLMLQR 360

Query: 349 VADDQERGFARQVDTAMALFEPLMILVMGAVVLFIVLAVLLPIMQLNQ 396
            A+       R+      + EPL+I+ MG VV+ IVLAV+LPI+QLNQ
Sbjct: 361 AANQLGAEVQRRAMHLATILEPLLIVAMGGVVMLIVLAVMLPIIQLNQ 408



 Score = 64.3 bits (155), Expect = 6e-15
 Identities = 48/147 (32%), Positives = 76/147 (51%), Gaps = 5/147 (3%)

Query: 256 IGNLLQVLESARLA---RSLAILCGSGVALLEALQVATETIGNRRIRLAMEQVRQHVQGG 312
           +G   ++  S  LA   R LA L  SG+ L  AL   T+       R  +  +R  V  G
Sbjct: 62  LGGGARIFSSTGLAVWTRQLAGLVSSGLPLERALTALTDEAETEPQRNLVASLRAEVNAG 121

Query: 313 TSLHRALDAS-QQFPPLLVNMVGSGEASGTLADMLERVADD-QERGFARQVDTAMALFEP 370
           +   RAL A  ++F P+   ++G+GE SG L  +L+R+ADD +ER   +Q     AL+  
Sbjct: 122 SPFARALAAHPREFSPIYTAVIGAGEQSGNLGLVLDRLADDLEERQALQQKLIGAALYPA 181

Query: 371 LMILVMGAVVLFIVLAVLLPIMQLNQG 397
           ++ LV   +V+F+V  V+  + Q+  G
Sbjct: 182 IVTLVAIVIVIFLVSYVVPQVAQVFAG 208