Pairwise Alignments

Query, 400 a.a., putative protein secretion protein for export from Pseudomonas putida KT2440

Subject, 398 a.a., general secretory pathway component, cryptic (NCBI) from Escherichia coli BW25113

 Score =  276 bits (705), Expect = 1e-78
 Identities = 160/393 (40%), Positives = 243/393 (61%), Gaps = 2/393 (0%)

Query: 4   YRYQAVDLAGKSHKASLQADSERHARQLLREQGLFARQLQRHDAGSRQPRRQRLSRAQLC 63
           YRY+A+   G+  +  + A+ ER AR  LRE+GLF   ++   +   + RR R+S ++L 
Sbjct: 3   YRYRAMTQDGQKLQGIIDANDERQARLRLREEGLFLLDIRPQKSSGVKTRRPRISHSELT 62

Query: 64  ELTRQLATLTGAGIPLVDALATLERQLRQPALHSVLVALRGSLAEGLGLARSLARQGAPF 123
             TRQLATL+ A +PL ++LA + +Q     L  VL  +R ++ EG  L+ +L      F
Sbjct: 63  LFTRQLATLSAAALPLEESLAVIGQQSSNKRLGDVLNQVRSAILEGHPLSDALQHFPTLF 122

Query: 124 TGLYCALVEAGERSGHLAQVLTRLADHLEQVQRQQHKARTALIYPAVLMGVSLAVVIGLM 183
             LY  LV+AGE+SG LA VL +LAD+ E  Q+ + K   +LIYP +L  V++ VVI L+
Sbjct: 123 DSLYRTLVKAGEKSGLLAPVLEKLADYNENRQKIRSKLIQSLIYPCMLTTVAIGVVIILL 182

Query: 184 TFVVPKLTEQFAHAGQSLPLITSLLIGLSQGLVHAGPWLLGVALLLGGLAGWL-LRKPHW 242
           T VVPK+TEQF H  Q LPL T +L+GLS  L   GP LL    ++  +  WL L++ + 
Sbjct: 183 TAVVPKITEQFVHMKQQLPLSTRILLGLSDTLQRTGPTLLATVFIV-AVGFWLWLKRGNN 241

Query: 243 CLRRDQLLLRLPRIGNLLQVLESARLARSLAILCGSGVALLEALQVATETIGNRRIRLAM 302
             R   +LLR+  IG L+  + SAR  R+L+IL  SGV LL+ + ++TE++ N  IR  +
Sbjct: 242 RHRFHAMLLRVALIGPLICAINSARYLRTLSILQSSGVPLLDGMNLSTESLNNLEIRQRL 301

Query: 303 EQVRQHVQGGTSLHRALDASQQFPPLLVNMVGSGEASGTLADMLERVADDQERGFARQVD 362
               ++V+ G S+H +L+ +  FPP+++ MV SGE SG L  ++ R AD+QE     ++ 
Sbjct: 302 ANAAENVRQGNSIHLSLEQTAIFPPMMLYMVASGEKSGQLGTLMVRAADNQETLQQNRIA 361

Query: 363 TAMALFEPLMILVMGAVVLFIVLAVLLPIMQLN 395
             +++FEP +I+ M  +VLFIV++VL P++QLN
Sbjct: 362 LTLSIFEPALIITMALIVLFIVVSVLQPLLQLN 394