Pairwise Alignments

Query, 400 a.a., putative protein secretion protein for export from Pseudomonas putida KT2440

Subject, 408 a.a., type II secretion system inner membrane protein GspF from Dickeya dadantii 3937

 Score =  303 bits (775), Expect = 8e-87
 Identities = 177/405 (43%), Positives = 257/405 (63%), Gaps = 12/405 (2%)

Query: 1   MPTYRYQAVDLAGKSHKASLQADSERHARQLLREQGLFARQL--QRHDAGSRQP------ 52
           M  ++YQA++  GK  +   +ADS RHARQLLRE+GL   ++  QR +  +R        
Sbjct: 1   MALFQYQALNAQGKKSQGMQEADSARHARQLLREKGLVPVKIEEQRGEVTTRSGFSLSLR 60

Query: 53  RRQRLSRAQLCELTRQLATLTGAGIPLVDALATLERQLRQPALHSVLVALRGSLAEGLGL 112
           R  R+S + L  LTRQLATL  A +PL +AL  + +Q  +P L +++ A+R  + EG  L
Sbjct: 61  RSHRISASDLALLTRQLATLVAAALPLEEALDAVAKQSEKPKLSALMAAVRAKVVEGHSL 120

Query: 113 ARSLARQGAPFTGLYCALVEAGERSGHLAQVLTRLADHLEQVQRQQHKARTALIYPAVLM 172
           A ++      F  LYCA+V AGE SGHL  VL RLAD+ EQ Q+ + + + A+IYP VL 
Sbjct: 121 AEAMGNFPGSFERLYCAMVAAGEASGHLDAVLNRLADYTEQRQQMRSRIQQAMIYPCVLT 180

Query: 173 GVSLAVVIGLMTFVVPKLTEQFAHAGQSLPLITSLLIGLSQGLVHAGPWLLGVALLLGGL 232
            V+++VV  L++ VVPK+ EQF H  Q+LPL T LL+G+S  +   GPW+  V LL+  +
Sbjct: 181 LVAISVVSILLSAVVPKVVEQFIHMKQALPLSTRLLMGVSDAVRAYGPWV--VLLLVLAV 238

Query: 233 AGW--LLRKPHWCLRRDQLLLRLPRIGNLLQVLESARLARSLAILCGSGVALLEALQVAT 290
            G+  LLR+    L   + LL LP IG + + L +AR AR+L+IL  S V LL+A++++ 
Sbjct: 239 MGFRVLLRQEKHRLVFHRRLLFLPLIGRIARGLNTARYARTLSILNSSAVPLLQAMRISG 298

Query: 291 ETIGNRRIRLAMEQVRQHVQGGTSLHRALDASQQFPPLLVNMVGSGEASGTLADMLERVA 350
           + + N   R  + Q    V+ G SLH+AL+ +  FPP++ +M+ SGE SG L  ML R A
Sbjct: 299 DVLTNDYARFRLGQATDAVREGVSLHKALEQTSLFPPMMRHMIASGERSGELDGMLTRAA 358

Query: 351 DDQERGFARQVDTAMALFEPLMILVMGAVVLFIVLAVLLPIMQLN 395
           D+Q+R F+ Q+  A+ LFEPL+++ M  +VLFIVLA+L PI+QLN
Sbjct: 359 DNQDREFSAQMTLALGLFEPLLVVSMAGIVLFIVLAILQPILQLN 403