Pairwise Alignments

Query, 584 a.a., Type II secretion pathway protein XcpQ from Pseudomonas putida KT2440

Subject, 742 a.a., Secretin XpsD from Xanthobacter sp. DMC5

 Score =  136 bits (343), Expect = 3e-36
 Identities = 127/494 (25%), Positives = 214/494 (43%), Gaps = 106/494 (21%)

Query: 135 VFSVRNAASEQVLGILKPLIDPRVGVITPYPAAHQ--------LVVTDWRSNLERIASLL 186
           ++ +RN+A E ++  L+ L+D   G ++      Q        +VV      L   A+ +
Sbjct: 251 IYPLRNSAPEPLIAELETLLDAGEGGLSHKMVKFQAINRMNSVMVVAKKPDLLRTAATWI 310

Query: 187 RQLDRPQEVPGSGSTQVIYLRHANAGEVVKVL---------RGLSQE------------- 224
            +LDR     G    +V  LR+  A +  +VL         +GL Q              
Sbjct: 311 ERLDRSDSSVG---VRVYRLRYGEARQTARVLNELFNGTSSQGLDQASNQIAPGSGSSAS 367

Query: 225 ----------------GAVPVEGAGEAEGKDRPVV-------------PAAGG----SGI 251
                           G  P +  G+     +PV              P+ GG    SGI
Sbjct: 368 SNGGGSNGPMSVQQRLGQTPTQNQGQGGQNAQPVNRGETDNELQGGSGPSGGGGAILSGI 427

Query: 252 RLEYEEGTNAVVMVGPDSELAAYRAIVEQLDIRRAQVVVEAIIAEVSDSSAQELGVQWLF 311
           R+  ++  N++++             + QLD  + QV +EA +AEV+ +     GVQ+  
Sbjct: 428 RITADQVNNSLLIYASQENYRIIERTLLQLDQPQLQVAIEATVAEVTLNDQLAYGVQFFL 487

Query: 312 ADEKFGAGIVNFGSNGVNIASIAGAAASGDNEALGDLLSTTTGATAGIGHFGGGFNFA-- 369
             +  G G     +NG  + +++       N+A+  +L               GFN    
Sbjct: 488 TSKDLGLG----KNNGSAVNTLSSEIT---NQAINRVLP--------------GFNLLIG 526

Query: 370 ------MLVNALKGKSGFNLLSTPTLLTLDNAEASILVGQEVPFVTGSVT--QNNANPYQ 421
                 M+++AL   +   +LS P+++ +DN +A++ VG EVP  TGS T   ++     
Sbjct: 527 RENQPKMILDALHTVTDVKVLSNPSVVVVDNQKATLQVGDEVPVSTGSATVLTSSNTVVN 586

Query: 422 TIERKEVGVKLRIKPQINIDNSVRLDIVQEVSSIAD----TSSASDVIT-----NKREIK 472
           TIE K  G+ L + P++N++  VRLDI QE+S++        S+SD  T     ++R +K
Sbjct: 587 TIEYKNTGIILHVTPRVNVNGQVRLDIEQEISNVTKQPTANGSSSDGSTLTPTVSQRRVK 646

Query: 473 TKVMVEDNGLVILGGLISDELSTSDQRVPLLGDIPYLGRLFRSDATRNTKQNLMVFIRPR 532
           + + V     V+L GLIS+      Q VP+L  IP +G  F    T   +  L++FIRP+
Sbjct: 647 STIAVTSGQTVLLAGLISERSDGVRQGVPVLDQIPGVGDAFAHKDTTVKRTELIIFIRPQ 706

Query: 533 ILRDGPSLAGLSED 546
           I+RD      ++E+
Sbjct: 707 IIRDNMDAHTVAEE 720