Pairwise Alignments

Query, 485 a.a., membrane-bound lytic murein transglycosylase F from Pseudomonas putida KT2440

Subject, 273 a.a., transporter substrate-binding domain-containing protein from Dickeya dianthicola ME23

 Score = 51.2 bits (121), Expect = 4e-11
 Identities = 57/276 (20%), Positives = 113/276 (40%), Gaps = 17/276 (6%)

Query: 7   LRQRCAKWLLATGLFLLLGACVEKPSTLERVKEDGVLRVITRNS--PATYFQDRNGETGF 64
           +++R A   L    + +L A  +  STL+RVK+ GV+R +  N   P +Y  D+N   GF
Sbjct: 1   MKKRLALMALGLSAYFMLSAA-QAGSTLDRVKQTGVVRNVLFNDYPPFSYLDDKNQLVGF 59

Query: 65  EYELVQHFADDLGVKLQIETADNLDELYDALGKPSGPVLAAAGLVSSERRKTQVRYSHPY 124
           + ++    A  LG KL++ T    + +     +    +   +   ++ER K  + ++ PY
Sbjct: 60  DVDVANAVAQKLGAKLELAT-PGWETIVGGKWQGRWDMCICSMTPNAERAKV-LDFAAPY 117

Query: 125 LEVTPQVIYRNGRPRPTGAKGLVGKKIMVLKGSSHADQLAE---------LKKQYPALQY 175
                 +I          A  L  KK+ +  GSS+ + L +         +   +  +Q 
Sbjct: 118 YSTFAVLIAHKDEKNIQSAADLSNKKVGLGLGSSYENYLNKSLVIPGGKPIAFPFDHVQA 177

Query: 176 EESDAVEVVDLLRMVDEGQIDLTLVDSNELAMNQVYFPNVRVAFDLGETRDQRWAVAAGE 235
             +D       L +    ++D  + D           P +R+  +L    +  W      
Sbjct: 178 VPTDEDMAFRNLALGPGKRLDAVISDRITAKPRIEKLPQLRILQEL--YAEPNWIAVDKG 235

Query: 236 DNSLLNEINEYLDKAQKNGTLQRLKDRYYGHVDVLG 271
           D      + + +   + +GTL+ +  +++G  D+ G
Sbjct: 236 DPEWSKTLADAIAALRADGTLKTISMKWFGE-DITG 270