Pairwise Alignments

Query, 447 a.a., carbohydrate-selective porin from Pseudomonas putida KT2440

Subject, 448 a.a., porin from Pseudomonas simiae WCS417

 Score =  626 bits (1615), Expect = 0.0
 Identities = 294/434 (67%), Positives = 347/434 (79%), Gaps = 1/434 (0%)

Query: 14  ALLALVGSSGTQAAEAFSSESKWMTGDWGGTRTELLDKGYDFTLDYVGEVAGNLHGGYND 73
           A  ALV S+   AA+AFS++SKWMTGDWGG RT+L+++G D   DYVGE+  N  GGYND
Sbjct: 16  AAAALVLSANAMAADAFSADSKWMTGDWGGERTKLIEQGIDIKADYVGEMGYNAKGGYND 75

Query: 74  DKTARYSDQFALGAHLDLQKILGWHDAEFKLAITERSGRNLSNDRISDPRAGQFSSVQEV 133
           DKT RYSDQF LG  LDLQK+ GW + + K+ +T R+G+N+SNDRI DPRAG  SS  EV
Sbjct: 76  DKTGRYSDQFGLGVALDLQKLWGWDNTQAKIQLTNRNGQNISNDRIGDPRAGTLSSSMEV 135

Query: 134 WGRGQTWRLTQMWIKQKYFDGALDVKFGRFGEGEDFNSFPCDFQNLAFCGSQVGNWVGGI 193
           +GRG   RLTQ WI+ + FD  LDVK G FGEGEDFN+FPCDFQNL+FCGSQVGN+V   
Sbjct: 136 YGRGHMVRLTQFWIQHQMFDNKLDVKLGYFGEGEDFNTFPCDFQNLSFCGSQVGNYVN-T 194

Query: 194 WYNWPVSQWALRVKYNITPEFFVQVGAFEQNPSNLETGNGFKLSGSGTKGAILPVEAVWS 253
           WYNWPVSQ A+RVKYNITPE + Q+GA+ QNPS LE GNGFKLSGSGTKG ++PVE VWS
Sbjct: 195 WYNWPVSQAAIRVKYNITPELYAQIGAYNQNPSQLEHGNGFKLSGSGTKGTVIPVELVWS 254

Query: 254 PKVNGLPGEYRLGYYYSTAKADDVYDDVNGNPQALTGEAFKSHSSKHGWWVVAQQQVTAH 313
           PKVN LPGEYR+GYY S A A DV +DVNGN   +T   F++ SSK G+W VAQQQ+T H
Sbjct: 255 PKVNNLPGEYRVGYYKSAADAPDVREDVNGNDAVITRADFRTRSSKKGYWFVAQQQLTTH 314

Query: 314 GGDVNRGLSLFANFTVHDKATNVVDNYQQVGLVYKGAFDARPKDDIGFGVARIHVNDDVK 373
            GD +RGL++ AN T HDK TN+VDNYQ + LVYKG FDARPKDD+G GVAR+HVN+DVK
Sbjct: 315 NGDASRGLNIAANATFHDKETNLVDNYQSLMLVYKGPFDARPKDDVGIGVARLHVNNDVK 374

Query: 374 KRAELLNAQSGINDYDNPGFVPLQRTEYNAELYYGFHVTNWLTVRPNLQYIKSPGGVDEV 433
           K AELLNA +G++DYDN  + P++ TEYN EL YGFHVTNWLTVRPNLQY+  PGGVD+V
Sbjct: 375 KNAELLNAANGVSDYDNALYTPIRETEYNVELNYGFHVTNWLTVRPNLQYVVQPGGVDKV 434

Query: 434 DNALVAGLKIQSSF 447
           DNALVAGLKIQS+F
Sbjct: 435 DNALVAGLKIQSTF 448