Pairwise Alignments

Query, 447 a.a., carbohydrate-selective porin from Pseudomonas putida KT2440

Subject, 421 a.a., porin from Pseudomonas simiae WCS417

 Score =  214 bits (545), Expect = 4e-60
 Identities = 145/446 (32%), Positives = 217/446 (48%), Gaps = 41/446 (9%)

Query: 10  LGSLALLALVGSSGTQAAEAFSSESKWMTGDWGGTRTELLDKGYDFTLDYVGEVAGNLHG 69
           LG L L   +G     AA    ++   +TGDWGG R EL  +G  FT +Y GE A N HG
Sbjct: 9   LGRLLLGLALG-----AALPVQADDTTLTGDWGGLRHELDAQGIRFTGEYSGETAYNAHG 63

Query: 70  GYNDDKTARYSDQFALGAHLDLQKILGWHDAE-FKLAITERSGRNLSNDRISDPRAGQFS 128
           G +  ++ARYS    LG   DL K+ G+++ +  ++ + +R G + S D +     G   
Sbjct: 64  GQH--RSARYSQNLKLGVQFDLGKLYGFNNGDRIQVTLNDRRGNSASEDLV-----GNRL 116

Query: 129 SVQEVWGRGQTWRLTQMWIKQKYFDGALDVKFGRFGEGEDFNSFP----CDFQNLAFCGS 184
            +QE +G G   RLT++  ++  F  AL+VK G    G D         C+F N  FCG 
Sbjct: 117 PIQENYG-GLYTRLTELSYERTLFTPALNVKLGYMAMGNDLGGLDSGILCNFMNAGFCGH 175

Query: 185 QVGNWVGGIWYNWPVSQWALRVKYNITPEFFVQVGAFEQNP-SNLETGNGFKLSGSGTKG 243
            +    G  W N+P +    RVKY+  P + ++V AF  +P SN  +   + L    T G
Sbjct: 176 PLNMSGGSGWTNYPNAHLGARVKYDFAPNWQLRVAAFNVDPQSNGNSSRAWHLGPKHTTG 235

Query: 244 AILPVEAVWSPKVNGLPGEYRLGYYYSTAKADDVYDDVNGNPQALTGEAFKSHSSKHGWW 303
            ++P+E V+      LPGEY+LGYYY ++    +  +             K  S + G +
Sbjct: 236 TVVPIELVYK-HAGSLPGEYKLGYYYDSSDVKRIGSN-------------KEVSGRGGHY 281

Query: 304 VVAQQQVTAHGGDVNRGLSLFANFTVHDKATNVVDNYQQVGLVYKGAFDARPKDDIGFGV 363
           ++  Q V A      R L  F  ++   +A +    +   G+V    F+ RP+D +  G 
Sbjct: 282 LLIDQAVWASESSAGRVLHAFGQYSAASEAASPFSKWYGAGVVLYKPFEGRPRDTLALGY 341

Query: 364 ARIHVNDDVKKRAELLNAQSGINDYDNPGFVPLQRTEYNAELYYGFHVTNWLTVRPNLQY 423
            R   N   ++  EL    +G NDY N     L   E   EL YG+  T WLT+RP++QY
Sbjct: 342 GRAVPNPRSREVQELAALNAG-NDYPN-----LNNAEQLIELSYGYQATPWLTLRPDVQY 395

Query: 424 IKSPGGV--DEVDNALVAGLKIQSSF 447
           I  PG    + +DNALV GL+ ++ F
Sbjct: 396 IIEPGAFSGENIDNALVLGLQAKAVF 421