Pairwise Alignments

Query, 447 a.a., carbohydrate-selective porin from Pseudomonas putida KT2440

Subject, 449 a.a., Outer membrane low permeability porin, OprB family from Sphingobium sp. HT1-2

 Score =  165 bits (417), Expect = 3e-45
 Identities = 130/443 (29%), Positives = 193/443 (43%), Gaps = 28/443 (6%)

Query: 11  GSLALLALVGSSGTQAAEAFSSESKWMTGDWGGTRTELLDKGYDFTLDYVGEVAGNLHGG 70
           G++A  A V  +  QA       S  +  D       L  +G   +L Y GE A N+ GG
Sbjct: 13  GAMACTAPVALAQDQAVADVDPPS--VQSDAPAPWQPLAAEGVTLSLSYTGEAATNVSGG 70

Query: 71  YNDDKTARYSDQFALGAHLDLQKILGWHDAEFKLAITERSGRNLSNDRISDPRAGQFSSV 130
              D T  ++ Q  +GA LDL +++G   A    A+T R G+NLS   I     G  +SV
Sbjct: 71  LRRDAT--HAGQVYVGAELDLDRMIGIDGAMLHFAVTNRHGKNLSAMAI-----GNNTSV 123

Query: 131 QEVWGRGQTWRLTQMWIKQKYFDGALDVKFGRFGEGEDFNSFP--CDFQNLAFCGSQVGN 188
           QE++G   T      W +Q + DG LD++ GR      F + P  C FQ  + CG+    
Sbjct: 124 QEIYGTQNTHLAILTW-QQSFLDGRLDIEAGRSQANIHFLNSPLYCHFQTNSACGNPTFV 182

Query: 189 WVGGIWYNWPVSQWALRVKYNITPEFFVQVGAFEQNPSNLE-TGNGFKLSGSGTKGAILP 247
           +    +  +P S W    K ++TP+  +  G +E +P     + +GF  S     G I+P
Sbjct: 183 FKNSNFTYFPASSWMAHAKLHVTPQVMLHAGVYEVSPDRKRASDHGFNFSTKNATGVIIP 242

Query: 248 VEAVWSPKV--NGLPGEYRLGYYYSTAKADDVYDDVNGNPQALTGEAFKSHSSKHGWWVV 305
            E  +S     + LPG Y LG ++      D   D  G    LTG A  + + + G +  
Sbjct: 243 WELSFSRDAADDRLPGHYILGGWFDRGDYADPLRDDQGGIAILTGRAAATRNGRSGLYAR 302

Query: 306 AQQQVTAHGGDVNRGLSLFANFTVHDKATNVVDNYQQVGLVYKGAFDARPKDDIGFGVAR 365
             QQ+T       RG+S+F     +         Y  +G+V  G F  R +D IGF +  
Sbjct: 303 FDQQLTRPDPASPRGVSIFGVAMTNLSGQVEESRYLGMGIVQTGTFAGRDQDTIGFAIND 362

Query: 366 IHVNDDVKKRAELLNAQSGINDYDNPGFVPLQRTEYNAELYYGFHVTNWLTVRPNLQYIK 425
              +D   +R       +G       G   ++R +Y  EL YG  V   + + PNLQYI 
Sbjct: 363 QRFSDLAIQRMNTARVAAG-------GRADIRRHQYMMELAYGLQVNPAIRLSPNLQYIL 415

Query: 426 SP---GGVD---EVDNALVAGLK 442
            P   G  D    + NA + G K
Sbjct: 416 HPDQTGAPDRTRNIRNAFILGFK 438