Pairwise Alignments

Query, 447 a.a., carbohydrate-selective porin from Pseudomonas putida KT2440

Subject, 437 a.a., hypothetical protein from Sphingobium sp. HT1-2

 Score =  204 bits (519), Expect = 5e-57
 Identities = 136/406 (33%), Positives = 198/406 (48%), Gaps = 21/406 (5%)

Query: 43  GTRTELLDKGYDFTLDYVGEVAGNLHGGYNDDKTARYSDQFALGAHLDLQKILGWHDAEF 102
           G RT L D G + T  YV E A ++ GG   D+ A Y+ Q    A +D  K  G    + 
Sbjct: 46  GWRTRLKDSGVNLTFSYVSESAASISGGR--DQGAAYTQQLLASAVVDTGKAFGLAGGKI 103

Query: 103 KLAITERSGRNLSNDRISDPRAGQFSSVQEVWGRGQTWRLTQMWIKQKYFDGALDVKFGR 162
              I  R G++L+  RI     G    VQE++G GQ  R  ++  +Q+   G   +K G 
Sbjct: 104 IATIIHRKGQDLTATRI-----GNLFEVQELFGGGQDLRPAELSYEQQLNGGRTALKIGL 158

Query: 163 FGEGEDFNSFP--CDFQNLAFCGSQVGNWVGGIWYNWPVSQWALRVKYNITPEFFVQVGA 220
           +  G+DF + P  C FQN AFC      +    +  +P+ +W +R + +I     + V A
Sbjct: 159 YHTGDDFATLPSGCQFQNFAFCPRPTTLFYNSGFSGFPIPRWGIRARQDIGHGLSISVAA 218

Query: 221 FEQNPSNLETGNGFKLSGSGTKGAILPVEAVW--SPKVNGLPGEYRLGYYYSTAKADDVY 278
           FE N    +TGNG++L+       +LPVE  W        LPG  R+G    T    DVY
Sbjct: 219 FEVNSIRAQTGNGWQLA-PRFDSVVLPVELGWKSGQGAGQLPGLVRVGGLIDTTDKPDVY 277

Query: 279 DDVNGNPQALTGEAFKSHSSKHGWWVVAQQQVTAHGGDVNRGLSLFANFTVHDKATNVVD 338
            D NG+  AL+G A  +   +   W +A++ +   G    RGLSLF   T+ D+AT  V 
Sbjct: 278 ADANGDSYALSGLAPATRHERWSAWAMAEKMIVRFGPG-ERGLSLFGTMTLSDRATARVP 336

Query: 339 NYQQVGLVYKGAFDARPKDDIGFGVARIHVNDDVKKRAELLNAQSGINDYDNPGFVPLQR 398
            +   G V +G +D RP+D+ G G+    VN  +  R    + QS   D D       QR
Sbjct: 337 LFLSGGFVARGLWDNRPRDNFGLGLVYASVNPRIADRQR--DQQSLGQDVDP------QR 388

Query: 399 TEYNAELYYGFHVTNWLTVRPNLQYIKSPGGVDEVDNALVAGLKIQ 444
            E + E++YG+  T  L +RPNLQYI   G      +A+VAG+ I+
Sbjct: 389 WEASGEIFYGWQATRALLLRPNLQYIHRVGATSRYPDAVVAGMTIK 434