Pairwise Alignments

Query, 447 a.a., carbohydrate-selective porin from Pseudomonas putida KT2440

Subject, 432 a.a., porin, putative from Sphingobium sp. HT1-2

 Score =  201 bits (512), Expect = 3e-56
 Identities = 132/445 (29%), Positives = 210/445 (47%), Gaps = 39/445 (8%)

Query: 13  LALLALVGSSGTQAA--EAFSSESKWMTGDWGGTRTELLDKGYDFTLDYVGEVAGNLHGG 70
           L LL + G+   + A  +  ++  + +TGDWGG RT L   G     DYVGE    + GG
Sbjct: 17  LTLLPVAGAHAQEVAPEKPVTAPRETLTGDWGGLRTRLKQAGVTVRADYVGEAFAAVDGG 76

Query: 71  YNDDKTARYSDQFALGAHLDLQKILGWHDAEFKLAITERSGRNLSNDRISDPRAGQFSSV 130
                   Y+ Q       D+ +I+G       + I +R G  LS+D +     G    +
Sbjct: 77  QRQGSA--YTQQLRASLDFDMDRIVGISGGIVHVTINDRRGVGLSSDIV-----GNRLPI 129

Query: 131 QEVWGRGQTWRLTQMWIKQKYFDGALDVKFGRFGEGEDFNSF--PCDFQNLAFCGSQVGN 188
           QE  G   T RL+++  +Q   +G L+++ G F  G D       C+F N AFC   +  
Sbjct: 130 QEAAGGNYT-RLSELSYEQNIDNGRLNLRLGYFAMGNDLGGMILGCNFVNAAFCAHPLSE 188

Query: 189 WVGGIWYNWPVSQWALRVKYNITPEFFVQVGAFEQNPSNLETGNGFKLSGSGTKGAILPV 248
                WYN+P ++W   V+Y I P+  ++ G ++ NP   +  N F+    GT G +LP+
Sbjct: 189 SGNSGWYNYPNARWGAAVRYRIRPDLALRTGVYQVNPRLNDPDNAFRPFAGGTTGVLLPL 248

Query: 249 EAVWSPKV----NGLPGEYRLGYYYSTAKADDVYDDVNGNPQALTGEAFKSHSSKHGWWV 304
           E  + P +    + LPG Y++G YY T++A        G    L G        ++G + 
Sbjct: 249 ELEYDPGIAPGSHVLPGHYKIGAYYDTSRAAR-----RGEQGMLRG--------RYGVYA 295

Query: 305 VAQQQVTAHGGDVNRGLSLFANFTVHDKATNVVDNYQQVGLVYKGAFDARPKDDIGFGVA 364
           +A Q +   G   NRGLS+FA FT + +A+  + ++   GLV  G F  R  D I  G+ 
Sbjct: 296 LADQMILREGTG-NRGLSVFAQFTANPEASAQITHWYAAGLVKTGTFAGRDADSISIGIV 354

Query: 365 RIHVNDDVKKRAELLNAQSGINDYDNPGFVPLQRTEYNAELYYGFHVTNWLTVRPNLQYI 424
              VN  +++      A++   D    G+  L   E   E+ YG  +  WL++RP++QYI
Sbjct: 355 HAQVNPRLRR------AEADAQDIPG-GYAALPVGETAIEMSYGIQLRRWLSIRPDVQYI 407

Query: 425 KSPGGVD--EVDNALVAGLKIQSSF 447
             PG       ++AL  G +++  F
Sbjct: 408 LDPGAFSYRRTNDALALGGQVKMQF 432