Pairwise Alignments

Query, 447 a.a., carbohydrate-selective porin from Pseudomonas putida KT2440

Subject, 488 a.a., carbohydrate porin from Magnetospirillum magneticum AMB-1

 Score = 52.8 bits (125), Expect = 2e-11
 Identities = 57/234 (24%), Positives = 90/234 (38%), Gaps = 37/234 (15%)

Query: 216 VQVGAFEQNPSNLETGNGFKLSGSGTKGAILPVEAVWSPKVNGLPGEYRLGYYYSTAKAD 275
           VQ G FE       +G G    GS      +           GL G YR+ Y +S  +A 
Sbjct: 290 VQAGVFE-------SGTGASFQGSNEFPFRIVQAETTERFFGGLEGTYRV-YAWSNDRAT 341

Query: 276 DVYDDVNGNPQALTGEAFKSHSSKHGWWVVAQQQVTAHGGDVNRGLSLFANFTVHDKATN 335
           D                F +   +H    ++  Q       V+  ++LF  +    K   
Sbjct: 342 D----------------FDNKRGRHAGLGLSLDQ------KVDDYVTLFGRYGYQLKGKT 379

Query: 336 VVDNYQQVGLVYKGAFDARPKDDIGFGVARIHVNDDVKKRAELLNAQSGINDYDNPGFVP 395
             D    +G    G++  R  D  G G+   H++   + ++E L+A     D D    V 
Sbjct: 380 RFDQSASIGGEVNGSYWGRGADGFGVGLVANHLSKTYRDKSETLDA-----DQDGAPDVG 434

Query: 396 LQRT--EYNAELYYGFHVTNWLTVRPNLQYIKSPGGVDEVDNALVAGLKIQSSF 447
            + T  E  AE+YY + V     + P+LQ I+ PGG    + A   GL+ Q ++
Sbjct: 435 YKATSFEQTAEIYYRYRVMPRFDLTPDLQIIRHPGGNPSGEVAYAVGLRGQLTY 488