Pairwise Alignments

Query, 241 a.a., DNA-binding response regulator from Pseudomonas putida KT2440

Subject, 241 a.a., Transcriptional regulatory protein OmpR from Xanthobacter sp. DMC5

 Score =  193 bits (490), Expect = 3e-54
 Identities = 108/232 (46%), Positives = 141/232 (60%), Gaps = 6/232 (2%)

Query: 8   ILMVDDDQEIRELLQTYLSRSGFQVHAEADGKGFRHALETTPCDLVILDVMLPDEDGFSL 67
           IL+VDDD EIR L   +L   G +V A    +  R A+     DLVILD+MLP   G  L
Sbjct: 11  ILIVDDDAEIRRLAGKFLREHGHKVTAAQGAREMREAMAAGTVDLVILDIMLPGVSGLDL 70

Query: 68  CRWVRQHPRQARVPIIMLTASSDEADRVIGLELGADDYLGKPFSPRELQARIKALLRRTE 127
           CR +R   R + VPIIMLTA   + DR++GLELGADDYL KPF+PREL ARI A+LRRT 
Sbjct: 71  CRDIR---RTSNVPIIMLTARGSDVDRIVGLELGADDYLAKPFNPRELLARIHAVLRRTR 127

Query: 128 FGQTAP--GNAVLAFDDWRLDTVSHRLFHRDGEEVILSGADFALLKLFLDHPQQILDRDT 185
               A   G   L F  W LDT    L + +G  V LS  ++ LL  FL+HPQ++L RD 
Sbjct: 128 LSDPAAVNGGTCLTFSGWTLDTRRRELTNPEGAIVDLSTGEYDLLLTFLEHPQRVLTRDQ 187

Query: 186 IGNATRGREPMPLDRIVDMAVSRLRQRLRDTDKPPRLIRTVRGSGYLLAAHV 237
           + +A + R     DR +D+ VSRLR++L ++   P +++TVRG+GY     V
Sbjct: 188 LMDAAKNRIATGFDRAIDIQVSRLRRKL-ESHGGPEMVKTVRGTGYFFVPEV 238