Pairwise Alignments

Query, 241 a.a., DNA-binding response regulator from Pseudomonas putida KT2440

Subject, 238 a.a., Transcriptional regulatory protein OmpR from Xanthobacter sp. DMC5

 Score =  196 bits (497), Expect = 5e-55
 Identities = 108/237 (45%), Positives = 155/237 (65%), Gaps = 6/237 (2%)

Query: 4   AGKSILMVDDDQEIRELLQTYLSRSGFQVHAEADGKGFRHALETTPCDLVILDVMLPDED 63
           A +++L+V+DD+EIR LL  +L R G+ V A  DG      L +   D+VILD+MLP ED
Sbjct: 2   APRTLLIVEDDREIRALLADFLGREGYGVLAAEDGAAMDRILASARPDMVILDLMLPGED 61

Query: 64  GFSLCRWVRQHPRQARVPIIMLTASSDEADRVIGLELGADDYLGKPFSPRELQARIKALL 123
           G S+CR +R    +  +PI+MLTA  D+ DR++GLE+GADDYL KPF+PREL ARI+A+L
Sbjct: 62  GLSICRRLRA---RGGMPILMLTAKGDDVDRIVGLEMGADDYLPKPFNPRELLARIRAVL 118

Query: 124 RRTE--FGQTAPGNAVLAFDDWRLDTVSHRLFHRDGEEVILSGADFALLKLFLDHPQQIL 181
           RR +    +  P N  +AF  +  D  +  +   DG  + L+ A+F LL  FL+ P+++L
Sbjct: 119 RRADGTLAEPTPRNRRVAFAGFVADLDARSVAEADGPLLDLTSAEFELLACFLERPKRVL 178

Query: 182 DRDTIGNATRGREPMPLDRIVDMAVSRLRQRLRD-TDKPPRLIRTVRGSGYLLAAHV 237
            RD + + TRGR   P DR +D++VSRLR++L   +++   LI+TVR  GYLL A V
Sbjct: 179 SRDQLLDWTRGRSADPFDRTIDVSVSRLRRKLSAVSEEAALLIKTVRNGGYLLTADV 235