Pairwise Alignments

Query, 241 a.a., DNA-binding response regulator from Pseudomonas putida KT2440

Subject, 240 a.a., Transcriptional regulatory protein OmpR from Xanthobacter sp. DMC5

 Score =  203 bits (516), Expect = 3e-57
 Identities = 114/234 (48%), Positives = 152/234 (64%), Gaps = 5/234 (2%)

Query: 5   GKSILMVDDDQEIRELLQTYLSRSGFQVHAEADGKGFRHALETTPCDLVILDVMLPDEDG 64
           G  IL+VDDD EIR+LL  YL+  GF+V A  DG+     L T   D V+LD+MLPD  G
Sbjct: 5   GPHILVVDDDLEIRKLLSRYLAAQGFRVTAAGDGREMDEKLTTQRIDFVVLDLMLPDASG 64

Query: 65  FSLCRWVRQHPRQARVPIIMLTASSDEADRVIGLELGADDYLGKPFSPRELQARIKALLR 124
             LCR +R    ++RVP+I+LTA  ++ DR+IGLE+GADDYLGKPF+PREL ARI+A+LR
Sbjct: 65  LDLCRALRA---RSRVPVILLTALKEDVDRIIGLEIGADDYLGKPFNPRELVARIRAVLR 121

Query: 125 RTEF-GQTAPGNAVLAFDDWRLDTVSHRLFHRDGEEVILSGADFALLKLFLDHPQQILDR 183
           RT     T+       F  +R +    R+   DG EV L+GA+F LL  FL+ P +IL R
Sbjct: 122 RTSVTDPTSSAVRAYGFAGFRAEPDLRRVTAADGSEVPLTGAEFDLLMAFLERPGRILSR 181

Query: 184 DTIGNATRGREPMPLDRIVDMAVSRLRQRLRDTDKPPRLIRTVRGSGYLLAAHV 237
           D + + TRGRE  P DR VD+ VSRLR++L D     ++++T+R  GY L+  V
Sbjct: 182 DQLLDITRGREAGPFDRSVDVLVSRLRRKLGD-QGAFQILKTLRNGGYQLSVRV 234