Pairwise Alignments

Query, 241 a.a., DNA-binding response regulator from Pseudomonas putida KT2440

Subject, 242 a.a., Two-component transcriptional response regulator, OmpR family from Variovorax sp. SCN45

 Score =  189 bits (479), Expect = 6e-53
 Identities = 101/236 (42%), Positives = 147/236 (62%), Gaps = 9/236 (3%)

Query: 8   ILMVDDDQEIRELLQTYLSRSGFQVHAEADGKGFRHALETTPCDLVILDVMLPDEDGFSL 67
           I+++DD+ +I +LL  YL   GF+V    DG+     +ET P DLV+LD+ LP EDGFS+
Sbjct: 7   IVVLDDEIDITQLLANYLHGHGFRVTQVHDGRALMALMETDPADLVLLDLGLPGEDGFSI 66

Query: 68  CRWVRQHPRQARVPIIMLTASSDEADRVIGLELGADDYLGKPFSPRELQARIKALLRRTE 127
            R +R+   +    ++++T   D  D+V+GLE+GADDY+ KPF  REL AR+KA+LRR  
Sbjct: 67  ARRMRE---RWHCGLVIVTGRGDAVDKVVGLEVGADDYVTKPFDLRELVARVKAVLRRLA 123

Query: 128 FGQTAPGNAVLAFDD------WRLDTVSHRLFHRDGEEVILSGADFALLKLFLDHPQQIL 181
                P  +  AF D      W+LDT +  L +  GE V L+G +F LL+ F  HP ++L
Sbjct: 124 PATPVPPASAGAFADRLRFAGWQLDTAARSLLNPSGEPVTLTGGEFDLLQAFARHPGRVL 183

Query: 182 DRDTIGNATRGREPMPLDRIVDMAVSRLRQRLRDTDKPPRLIRTVRGSGYLLAAHV 237
            RD +   TRGRE  P DR +D+ V RLR+++    + P+LI++VRG+GY+L   V
Sbjct: 184 SRDFLLEQTRGREAAPFDRTIDVQVGRLRKKIEADAEDPQLIKSVRGAGYILVPPV 239