Pairwise Alignments

Query, 241 a.a., DNA-binding response regulator from Pseudomonas putida KT2440

Subject, 239 a.a., DNA-binding response regulator from Pseudomonas putida KT2440

 Score =  184 bits (468), Expect = 1e-51
 Identities = 109/231 (47%), Positives = 146/231 (63%), Gaps = 6/231 (2%)

Query: 7   SILMVDDDQEIRELLQTYLSRSGFQVHAEADGKGFRHALETTPCDLVILDVMLPDEDGFS 66
           ++L+VDDD EIRELL  YL+ +G+ V A ADG+  R  L     +LV+LD+MLP EDG S
Sbjct: 4   TLLVVDDDDEIRELLCDYLTDAGYNVLAAADGQQMRDQLARHKVELVVLDLMLPGEDGLS 63

Query: 67  LCRWVRQHPRQARVPIIMLTASSDEADRVIGLELGADDYLGKPFSPRELQARIKALLRRT 126
           LCR ++  P  A   +IML+A     DR+IGLE+GADDYL KPF PREL ARIKA+LRR 
Sbjct: 64  LCRQLQATPGLA---VIMLSAKGSTLDRIIGLEVGADDYLAKPFEPRELIARIKAVLRRP 120

Query: 127 E-FGQTAPGNAVLA--FDDWRLDTVSHRLFHRDGEEVILSGADFALLKLFLDHPQQILDR 183
           +  G +A    V A  F  +RL+ V   L   DGE + L  +D+ +L+  L+   +++ R
Sbjct: 121 QRLGTSAEEPMVDAQLFAGFRLEHVKRLLTRPDGETLTLPRSDYRVLRELLEANNRVVSR 180

Query: 184 DTIGNATRGREPMPLDRIVDMAVSRLRQRLRDTDKPPRLIRTVRGSGYLLA 234
           D +  +  GR+ +P DR VDM VSRLRQ+LR        I T+R  GYLL+
Sbjct: 181 DQLTRSAFGRDHLPDDRSVDMCVSRLRQQLRRAPAGTAQILTIRNEGYLLS 231