Pairwise Alignments

Query, 241 a.a., DNA-binding response regulator from Pseudomonas putida KT2440

Subject, 246 a.a., Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain from Enterobacter asburiae PDN3

 Score =  211 bits (536), Expect = 1e-59
 Identities = 110/234 (47%), Positives = 157/234 (67%), Gaps = 5/234 (2%)

Query: 8   ILMVDDDQEIRELLQTYLSRSGFQVHAEADGKGFRHALETTPCDLVILDVMLPDEDGFSL 67
           IL+VDDD++IREL+  YL +SG++    A+GK  R  L+    DLV+LDVM+P +DG +L
Sbjct: 7   ILVVDDDRDIRELIVDYLGKSGYRATGAANGKEMRVVLDKQHIDLVVLDVMMPGDDGLTL 66

Query: 68  CRWVRQHPRQARVPIIMLTASSDEADRVIGLELGADDYLGKPFSPRELQARIKALLRRTE 127
           CR +R   +   +PI+MLTA ++E DR++GLE+GADDY+ KPF  REL ARIKA+LRR  
Sbjct: 67  CRELRVG-KYKDLPILMLTARNEETDRILGLEMGADDYVVKPFVARELLARIKAILRRFR 125

Query: 128 FG----QTAPGNAVLAFDDWRLDTVSHRLFHRDGEEVILSGADFALLKLFLDHPQQILDR 183
                 Q      ++ F +W+LDTV+  L   +G  V LSGA++ LL++FLDHPQ++L R
Sbjct: 126 TMPPNLQVTEAGRLVMFGEWQLDTVARHLIDPEGVIVALSGAEYRLLRVFLDHPQRVLTR 185

Query: 184 DTIGNATRGREPMPLDRIVDMAVSRLRQRLRDTDKPPRLIRTVRGSGYLLAAHV 237
           D + N T+GR+    +R +D+ VSR+RQRL +  + P  I+TVR  GY+    V
Sbjct: 186 DQLLNLTQGRDAELFERSIDLLVSRVRQRLNEDARTPAYIKTVRSEGYVFTMPV 239