Pairwise Alignments

Query, 170 a.a., RNA polymerase subunit sigma-24 from Pseudomonas putida KT2440

Subject, 166 a.a., RNA polymerase subunit sigma-24 from Pseudomonas simiae WCS417

 Score = 59.3 bits (142), Expect = 3e-14
 Identities = 44/138 (31%), Positives = 71/138 (51%), Gaps = 8/138 (5%)

Query: 17  LLRTLQRMVGNPSTAEDLLQETYLRVSRALGERPIEHIEPFVFQTARNLALD-HLRARRV 75
           L+ T  R + N   AEDL  +T++RV  +     +E    ++ QTARN+A+D + R  R 
Sbjct: 18  LIGTWTRRLRNRQQAEDLAHDTFVRVLESKSSE-VEQPRAYLHQTARNIAVDAYRREDRR 76

Query: 76  QARMLVDDVPDEVLHSVAAPATSSEDAAHAEQLLKHLSVSLNQLSERQQRIFILSRLHGA 135
           +A  L      E     +  +   E   HA QL   +  +L++L    ++IFI  ++ G 
Sbjct: 77  EAITL------EAFDQRSPNSGDPEHFMHAIQLADSIERALSELPLNCRKIFIWQKIEGL 130

Query: 136 TYLEIAEQLSVSPSTVQK 153
           T  EIAE+L +S + V+K
Sbjct: 131 TQQEIAERLGLSKNMVEK 148