Pairwise Alignments

Query, 170 a.a., RNA polymerase subunit sigma-24 from Pseudomonas putida KT2440

Subject, 199 a.a., hypothetical protein from Sphingobium sp. HT1-2

 Score = 67.8 bits (164), Expect = 1e-16
 Identities = 46/150 (30%), Positives = 72/150 (48%), Gaps = 6/150 (4%)

Query: 6   FNSVFLVQRLTLLRTLQRMVGNPSTAEDLLQETYLRVSRALGERPIEHIEPFVFQTARNL 65
           F    L     L   L+R+V +    +D++ E   R          +  + F+FQ ARNL
Sbjct: 15  FKQAILPHEGALRSRLRRVVSHRQDVDDIVAECMTRAYANGDIHRAQSGKAFLFQIARNL 74

Query: 66  ALDHLRARRVQARMLVDDVPDEVLHSVAAPATSSEDAAHAEQLLKHLSVSLNQLSERQQR 125
            +D  R  ++ +  LV ++       V     S+E+A HA   L+HL   L+ L  + +R
Sbjct: 75  LIDEARREKIVSLELVAEL------DVLQTDNSTEEALHARDELRHLQAILDTLPAQCRR 128

Query: 126 IFILSRLHGATYLEIAEQLSVSPSTVQKEL 155
            FIL R+H  +  EIAE++ +S  TV K L
Sbjct: 129 AFILRRVHEKSVKEIAEEMQLSVFTVDKHL 158