Pairwise Alignments

Query, 170 a.a., RNA polymerase subunit sigma-24 from Pseudomonas putida KT2440

Subject, 191 a.a., RNA polymerase sigma-70 factor, ECF subfamily from Pseudomonas putida KT2440

 Score = 92.8 bits (229), Expect = 3e-24
 Identities = 56/161 (34%), Positives = 91/161 (56%), Gaps = 5/161 (3%)

Query: 2   SQSRFNSVFLVQRLTLLRTLQRMVGNPSTAEDLLQETYLRVSRALGERPIEHIEPFVFQT 61
           +++RF  VF  QR  +   + R VG  +TA DL+QE +LR  R   E  +E ++ ++ + 
Sbjct: 17  ARARFVQVFQAQRARMEALVSRRVGCRATASDLVQELFLRFWRR-PEVKVEALDTYLLRC 75

Query: 62  ARNLALDHLRARRVQARMLVDDVPDEVLHSVAAPATSSEDAAHAEQLLKHLSVSLNQLSE 121
           A NLA+DHLR+   + R+    VP     S A+ A + E A   +  L+ +  +L  L E
Sbjct: 76  AGNLAIDHLRSESSRERVAEAAVPV----SEASLAQAPEQAVEVDHDLQRIEATLRALPE 131

Query: 122 RQQRIFILSRLHGATYLEIAEQLSVSPSTVQKELKLIMAIC 162
           R ++IF+L+R+HG  Y EIA+ + +S S V+K +   +  C
Sbjct: 132 RTRQIFLLNRIHGCKYSEIAKAMQLSQSAVEKHMMRALEAC 172