Pairwise Alignments

Query, 170 a.a., RNA polymerase subunit sigma-24 from Pseudomonas putida KT2440

Subject, 168 a.a., putative RNA polymerase sigma-70 factor from Pseudomonas putida KT2440

 Score = 60.1 bits (144), Expect = 2e-14
 Identities = 42/147 (28%), Positives = 70/147 (47%), Gaps = 8/147 (5%)

Query: 21  LQRMVGNPSTAEDLLQETYLRVSRALGERPIEHIEPFVFQT--ARNLALDHLRARRVQAR 78
           L R +GN   A DL  +T++R+    G  P    EP    T  A+ L +D  R + V+  
Sbjct: 27  LGRKLGNACDAADLAHDTFVRLLSRQGN-PYFGNEPRALLTHIAKGLVVDRWRRQDVERA 85

Query: 79  MLVDDVPDEVLHSVAAPATSSEDAAHAEQLLKHLSVSLNQLSERQQRIFILSRLHGATYL 138
            L     + + H       S E      + L  +   L  +  R +++F+LS+L G TY 
Sbjct: 86  YL-----EAIAHLPQPEVPSPETRWLILETLYRIDAMLRDMPARVRQVFLLSQLDGLTYA 140

Query: 139 EIAEQLSVSPSTVQKELKLIMAICMGV 165
           +IAEQL VS  T++++++     C+ +
Sbjct: 141 QIAEQLQVSLITIKRDMRTAFLACLSI 167