Pairwise Alignments

Query, 170 a.a., RNA polymerase subunit sigma-24 from Pseudomonas putida KT2440

Subject, 171 a.a., RNA polymerase sigma-70 factor, ECF subfamily from Pseudomonas putida KT2440

 Score = 67.0 bits (162), Expect = 2e-16
 Identities = 41/142 (28%), Positives = 73/142 (51%), Gaps = 5/142 (3%)

Query: 21  LQRMVGNPSTAEDLLQETYLRVSRALGERPIEHIEPFVFQTARNLALDHLRARRVQARML 80
           L+  VG    A DL Q+T++R+ RA    P++    ++   AR L +D  R R ++    
Sbjct: 27  LRSRVGCSEHAADLAQDTFVRLLRARQMSPLKEPRAYLSSIARGLMIDQFRRRALERAY- 85

Query: 81  VDDVPDEVLHSVAAPATSSEDAAHAEQLLKHLSVSLNQLSERQQRIFILSRLHGATYLEI 140
                + + H   A   S ED       L+ L  +L QL  R ++ F+L++L G + +++
Sbjct: 86  ----QEGLAHLPEAEVPSEEDKLVILDSLERLDRALQQLKPRVRQAFLLAQLDGLSIVQV 141

Query: 141 AEQLSVSPSTVQKELKLIMAIC 162
           A++L VS +TV+++L   +  C
Sbjct: 142 AQRLGVSRATVERDLAKALGAC 163