Pairwise Alignments

Query, 351 a.a., putative Transmembrane sensor from Pseudomonas putida KT2440

Subject, 308 a.a., sugar ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score = 90.9 bits (224), Expect = 4e-23
 Identities = 85/291 (29%), Positives = 120/291 (41%), Gaps = 10/291 (3%)

Query: 55  ALDWLVRLQCADAA--DTQAFEAWLSAAPENAEAYVEAEALWNGTPLHKVATHMHQQQRR 112
           A  WL  L+   A   D  A + W  + P++ + + +A+ L         A  M    R 
Sbjct: 9   AAQWLALLESGAATERDHAALQHWRDSHPQHEQTWQKAQTLRQRFSDLPQALAMASLDRP 68

Query: 113 SWRGRLRSHWKPLATAALLLVGLFTVGNLPMRL-QADHLTVVGERQRLQLEDGAKVLLNT 171
              GR     + L  AAL+         LP+   +AD  T  GER+R+ L DG  + LNT
Sbjct: 69  H-PGRRAVLKRALGIAALVPTAWLISRQLPIEAWRADLHTATGERKRIPLADGGSLQLNT 127

Query: 172 NSAFASERQDGRQVARLLQGEAYFQVPEGAQLPLEVEAGPLRAQVRDTDFAVRYLDGEAQ 231
            +A   +    R    L+ GE    VP  A + +    G L   V   D  VR       
Sbjct: 128 ATAVDVDLAQRR--ITLVDGELALNVPGAAAVTVRTRYGEL--SVSQADVCVRQQASGCL 183

Query: 232 VRVQRGDVDLQGERDQRIRLSAGDSISVGPQGFGQRQRPDMHKDLAWIDGRLVFENCPLS 291
           V V +G V ++    Q   L  G    +   G G     D+   L W DG L  +N  L 
Sbjct: 184 VSVLKGSVQVRDLNGQMTTLQGGQQAPLKASGLGAWVPFDV-VQLGWRDGVLTAQNQALG 242

Query: 292 QVLAEVQRYYPGWIINRNAQLEHVAVTGNYRLDQPLETLRALAHITSAQLH 342
             L E++RY PG ++     LE + VTG++RLD     L  LA     +LH
Sbjct: 243 DFLRELERYRPG-VLRWEPSLETLRVTGSFRLDDTDRILNLLASTLGLELH 292