Pairwise Alignments

Query, 351 a.a., putative Transmembrane sensor from Pseudomonas putida KT2440

Subject, 325 a.a., sugar ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score =  118 bits (295), Expect = 2e-31
 Identities = 101/319 (31%), Positives = 147/319 (46%), Gaps = 24/319 (7%)

Query: 40  PSPARPDARARAMDEALDWLVRLQCADAADTQA-FEAWLSAAPENAEAYVEAEALW--NG 96
           P+PA+  A       AL WL  L    +   QA F  WL A P + EAY +A+ LW  + 
Sbjct: 5   PTPAQEQA-------ALAWLSLLHDQPSGGDQATFSQWLRADPAHVEAYAQAQVLWELSE 57

Query: 97  TPLHKVATHMH-------QQQRRSWRGRLRSHWKPLATAALLLVGLFT-VGNLPMR---- 144
            P  K+A                S R R+      LA AA LL+ +F  VG  P R    
Sbjct: 58  VPARKLADEEALVLQGYLNAMNPSKRSRVARWSGALAMAACLLLMVFMGVGWQPSRWVDD 117

Query: 145 LQADHLTVVGERQRLQLEDGAKVLLNTNSAFASERQDGRQVARLLQGEAYFQVPEGAQLP 204
             AD++T  GE + + L D ++V L+ +SA A +   G +  +L +G  +F V    Q  
Sbjct: 118 FGADYVTAPGEVKTVTLADQSQVTLDADSAIAVDFTQGERHIQLRRGAGFFSVTHTGQ-S 176

Query: 205 LEVEAGPLRAQVRDTDFAVRYLDGEAQVRVQRGDVDLQ-GERDQRIRLSAGDSISVGPQG 263
             VEAG   A+V  T F VR     A+V V  G V +   ++ Q+  L+AG  ++     
Sbjct: 177 FVVEAGSGEARVLGTQFEVRLQPAGAEVTVLSGRVGVTPSKQGQQQILTAGQQVAYAEGV 236

Query: 264 FGQRQRPDMHKDLAWIDGRLVFENCPLSQVLAEVQRYYPGWIINRNAQLEHVAVTGNYRL 323
                  D    LAW DG L +   PLS V+ +++RYYPG I+  N ++    V+G++  
Sbjct: 237 ADALHAVDSESRLAWRDGWLNYYKAPLSDVVKDLERYYPGRILLLNKEMGAKRVSGSFPS 296

Query: 324 DQPLETLRALAHITSAQLH 342
             P   L AL  +   + H
Sbjct: 297 KDPQAVLNALQAVLGFEQH 315