Pairwise Alignments

Query, 351 a.a., putative Transmembrane sensor from Pseudomonas putida KT2440

Subject, 323 a.a., two component sensor kinase from Agrobacterium fabrum C58

 Score =  112 bits (281), Expect = 1e-29
 Identities = 85/306 (27%), Positives = 139/306 (45%), Gaps = 13/306 (4%)

Query: 54  EALDWLVRLQCADAADTQA--FEAWLSAAPENAEAYVEAEALWNG--TPLHKVATHMHQQ 109
           EA DW+ R +  D  +T+   F  W+   PEN  AY  A+ +     T +   A      
Sbjct: 20  EAADWVFRNRDPDQPETELAEFRRWMELDPENCRAYTAAKRILGEARTAIRSDAGLREAP 79

Query: 110 QRRSWRGR--LRSHWKPLATAALLLVGLFTVGNLPMRLQADHLTVVGERQRLQLEDGAKV 167
              S RGR  + S    +A A  L + L    + PMR+ AD ++   E   + LEDG++V
Sbjct: 80  VSSSSRGRNAIISSVVAIAAAGTLFIAL----DGPMRMSADIMSDTDEMPEVTLEDGSRV 135

Query: 168 LLNTNSAFASERQDGRQVARLLQGEAYFQVPEGAQLPLEVEAGPLRAQVRDTDFAVRYLD 227
            LN +SA A +    R+  RLL+G+A+FQV   A+ P  V A         T F VR   
Sbjct: 136 QLNASSAIALDFTSERRTVRLLRGQAFFQVSPDAKRPFSVSADDTLVTALGTAFDVRQSA 195

Query: 228 GEAQVRVQRGDVDLQGERDQRIRLSAGDS---ISVGPQGFGQRQRPDMHKDLAWIDGRLV 284
            + ++ V    V +  +    + +  G+    + +   G    ++ D +  LAW  G+L 
Sbjct: 196 TDTRIAVTEHSVRVDFKEPGALPVKVGEGEEVLHLNETGKSTIRKTDANTALAWRRGQLT 255

Query: 285 FENCPLSQVLAEVQRYYPGWIINRNAQLEHVAVTGNYRLDQPLETLRALAHITSAQLHEY 344
            +N PLS V+ E+QR++ G I+  N       V+G   +      L  L    + Q ++ 
Sbjct: 256 VDNMPLSYVIEEIQRHFHGRIVIGNEATARRVVSGTLFVTDTESALNFLRTALNIQTYKI 315

Query: 345 PALVIL 350
             ++++
Sbjct: 316 GPIIVV 321