Pairwise Alignments

Query, 502 a.a., Sigma-54 dependent transcriptional regulator/sensory box protein from Pseudomonas putida KT2440

Subject, 464 a.a., Regulatory protein AtoC from Xanthobacter sp. DMC5

 Score =  235 bits (600), Expect = 2e-66
 Identities = 139/318 (43%), Positives = 191/318 (60%), Gaps = 16/318 (5%)

Query: 190 FDALLGESPAIRTLKARALRVAALDAPLLVHGETGTGKELVARACHAVSSRHAAPFLALN 249
           FD LLGES     +  +   VA   A +L+ GE+GTGKELVARA H  S R   PF+A+N
Sbjct: 143 FDNLLGESAVFHHVLRQVTEVAPSRASVLLLGESGTGKELVARAIHYNSPRRDLPFVAVN 202

Query: 250 CAALPESLAESELFGYAPGAFTGAQRGGKPGLMELANQGTVFLDEIGEMSPYLQAKLLRF 309
           CAA+PE+L ESELFG+  GAFTGA  G + G    ANQGT+FLDEI +M   +QAK+LR 
Sbjct: 203 CAAIPETLIESELFGHVKGAFTGAT-GVREGRFAAANQGTLFLDEIADMPLPVQAKVLRA 261

Query: 310 LSDGSFRRVGGDREVKVDVRIISATHRDLERMVAEGSFREDLFYRLNVLNLEVPPLRDRG 369
           L + SF  VG  + V VDVRII+ATH+DL++ +A G+FR DL+YRL V  + +PPLR+R 
Sbjct: 262 LQEQSFEPVGSSKSVSVDVRIIAATHKDLQKEIAAGTFRMDLYYRLAVFPITLPPLRERT 321

Query: 370 QDILMLAHFFMQQACTQIQRPACRLTPSTHSALLANPWPGNVRQLQNVIFRAAAICEGNL 429
            DI++LA  F+  A   + +    LTP   + L    WPGNVR+LQN + RAA +  G+L
Sbjct: 322 DDIVLLADHFLAAATRDMGKRVKGLTPEAQAMLTRYRWPGNVRELQNCMERAAIVARGDL 381

Query: 430 VDIGDL---------DIAGTSVARGQDGEVASLEQAVGDFERELLQRLYASYPSTRQLAG 480
           V  GDL         D+   ++    D E++ +E+        +LQ L  S     + A 
Sbjct: 382 VGPGDLLLFEANGDTDVQSHTLNGDLDSELSRIEREF------VLQALKDSGGVQARAAE 435

Query: 481 RLQTSHTAIAQRLRKYGI 498
           +L  +  ++  R++K  I
Sbjct: 436 KLGITERSLWHRIKKLAI 453