Pairwise Alignments

Query, 502 a.a., Sigma-54 dependent transcriptional regulator/sensory box protein from Pseudomonas putida KT2440

Subject, 458 a.a., Fis family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  231 bits (588), Expect = 5e-65
 Identities = 136/307 (44%), Positives = 184/307 (59%), Gaps = 7/307 (2%)

Query: 193 LLGESPAIRTLKARALRVAALDAPLLVHGETGTGKELVARACHAVSSRHAAPFLALNCAA 252
           L+G SP +  L+ +   +AA  A +L+ GETG GKE+VARA H +SSR + PF+A+N  A
Sbjct: 148 LVGHSPQMLRLREQIGALAATRADVLILGETGAGKEVVARALHDLSSRRSGPFVAINAGA 207

Query: 253 LPESLAESELFGYAPGAFTGAQRGGKPGLMELANQGTVFLDEIGEMSPYLQAKLLRFLSD 312
           L ES+ ESELFG+ PGAFTGAQ+  + G  E AN GT+FLDEI  MS  +Q KLLR L +
Sbjct: 208 LAESVVESELFGHEPGAFTGAQKR-RIGKFEFANGGTLFLDEIESMSLDVQVKLLRLLQE 266

Query: 313 GSFRRVGGDREVKVDVRIISATHRDLERMVAEGSFREDLFYRLNVLNLEVPPLRDRGQDI 372
               R+GG++ + +D+RII+AT  DL +   +G FR DL+YRLNV  L +PPLR+RG+D 
Sbjct: 267 RVVERLGGNQLIPLDIRIIAATKEDLRQSADQGRFRADLYYRLNVAPLRIPPLRERGEDA 326

Query: 373 LMLAHFFMQQACTQIQRPACRLTPSTHSALLANPWPGNVRQLQNVIFRAAAICEGNLVDI 432
           LML   F  +A ++   P   L P   + LL + WPGNVR+LQN   R A   E  L + 
Sbjct: 327 LMLFQHFADEASSRHGLPLHELQPGQRALLLRHSWPGNVRELQNAAERFALGLELALDNT 386

Query: 433 GDLDIAGTSVARGQDGEVASLEQAVGDFERELL-QRLYASYPSTRQLAGRLQTSHTAIAQ 491
            D   AGT  +         L + V  FE+ L+   L   + S R LA  L      +  
Sbjct: 387 PDNPSAGTLTS-----TPGGLSEQVEQFEKSLIAAELTRPHSSMRSLAEALGVPRKTLHD 441

Query: 492 RLRKYGI 498
           +LRK+G+
Sbjct: 442 KLRKHGL 448