Pairwise Alignments

Query, 502 a.a., Sigma-54 dependent transcriptional regulator/sensory box protein from Pseudomonas putida KT2440

Subject, 456 a.a., Two-component system response regulator protein from Variovorax sp. SCN45

 Score =  235 bits (600), Expect = 2e-66
 Identities = 143/325 (44%), Positives = 195/325 (60%), Gaps = 13/325 (4%)

Query: 185 DHAEGFDALLGESPAIRTLKARALRVAALDAPLLVHGETGTGKELVARACHAVSSRHAAP 244
           D  +G D L+G S A+R +  R    AA   P+LV GETGTGKE+VARA H  S+R   P
Sbjct: 133 DDDDGTD-LIGPSQAMREVHKRIGLAAANSMPVLVLGETGTGKEMVARALHRHSARAGRP 191

Query: 245 FLALNCAALPESLAESELFGYAPGAFTGAQRGGKPGLMELANQGTVFLDEIGEMSPYLQA 304
           F+A+NC+A+P+ L ESELFG+  GAFTGA  G +PG    A+ G + LDEIG+MS  +QA
Sbjct: 192 FVAVNCSAIPKELLESELFGHVRGAFTGAT-GERPGCFRAADGGVLLLDEIGDMSLDVQA 250

Query: 305 KLLRFLSDGSFRRVGGDREVKVDVRIISATHRDLERMVAEGSFREDLFYRLNVLNLEVPP 364
           K+LR L +G    +G  R VKVDVR+++ATHRDL   V EG FREDL YRL+VL++ +PP
Sbjct: 251 KILRALQEGEVTPLGSHRTVKVDVRVVAATHRDLAAAVREGRFREDLLYRLDVLSIRMPP 310

Query: 365 LRDRGQDILMLAHFFMQQACTQ---IQRPACRLTPSTHSALLANPWPGNVRQLQNVIFRA 421
           LR+R  DI+ LA  F+++A  Q      P   L+      LL++PWPGNVR+L+NV+ R 
Sbjct: 311 LRERLADIIPLAEHFLRRAAMQGAPDAVPNKALSAEAAQRLLSHPWPGNVRELRNVMERC 370

Query: 422 AAICEGNLVDIGDLDIAGTSVARGQ-------DGEVASLEQAVGDFERELLQRLYASYPS 474
            A+    ++   DLD+A  +   G+       D     L  AV   ER L+    A    
Sbjct: 371 HALVRHRVIGGADLDLALGASPAGEASATLPADWLEGELPAAVERLERLLIAHALAQTQG 430

Query: 475 TR-QLAGRLQTSHTAIAQRLRKYGI 498
            R + A RL      + ++L +YG+
Sbjct: 431 NRAETARRLGIHRQLLYRKLAQYGL 455