Pairwise Alignments

Query, 502 a.a., Sigma-54 dependent transcriptional regulator/sensory box protein from Pseudomonas putida KT2440

Subject, 518 a.a., DNA-binding transcriptional dual regulator (NO) from Pseudomonas putida KT2440

 Score =  231 bits (590), Expect = 4e-65
 Identities = 136/324 (41%), Positives = 202/324 (62%), Gaps = 24/324 (7%)

Query: 193 LLGESPAIRTLKARALRVAALDAPLLVHGETGTGKELVARACHAVSSRHAAPFLALNCAA 252
           L+G+SPA + L      V + D  +L+ GETG GKELVA+A H  SSR   P ++LNCAA
Sbjct: 193 LIGQSPAHKRLVEEIRLVGSSDLTVLITGETGVGKELVAQALHRASSRADKPLVSLNCAA 252

Query: 253 LPESLAESELFGYAPGAFTGAQRGGKPGLMELANQGTVFLDEIGEMSPYLQAKLLRFLSD 312
           LP++L ESELFG+  GAFTGA  G + G  ELAN GT+FLDE+GE+   +QAKLLR L  
Sbjct: 253 LPDTLVESELFGHVRGAFTGAH-GERRGKFELANGGTLFLDEVGELPLTVQAKLLRVLQS 311

Query: 313 GSFRRVGGDREVKVDVRIISATHRDLERMVAEGSFREDLFYRLNVLNLEVPPLRDRGQDI 372
           G  +R+G DRE +VDVR+I+AT+RDL   V  G+FR D ++RL+V  L VPPLR+RG+D+
Sbjct: 312 GQLQRLGSDREHRVDVRLIAATNRDLAAEVRTGNFRADFYHRLSVYPLHVPPLRERGRDV 371

Query: 373 LMLAHFFMQQACTQIQRPACRLTPSTHSALLANPWPGNVRQLQNVIFRAAAICEGN---- 428
           L+LA +F++Q  +++   + RL+    +AL+A  WPGNVR+L+++I R+A    G     
Sbjct: 372 LLLAGYFLEQNRSRLGLNSLRLSHEAQAALIAYDWPGNVRELEHLIGRSALKALGQHPDR 431

Query: 429 ----LVDIGDLDIAGTSVARGQDGEVAS-----------LEQAVGDFEREL----LQRLY 469
                ++  DLD+  ++   G     A+           L +AV  ++R++    LQR  
Sbjct: 432 PRILTLEAIDLDLRVSATTPGTLPSPAAPLQVVTPPEGGLREAVDSYQRQVIEACLQRHQ 491

Query: 470 ASYPSTRQLAGRLQTSHTAIAQRL 493
            ++ +  +  G  + + + +A+RL
Sbjct: 492 DNWAAAARELGLDRANLSRLARRL 515