Pairwise Alignments

Query, 502 a.a., Sigma-54 dependent transcriptional regulator/sensory box protein from Pseudomonas putida KT2440

Subject, 453 a.a., Transcriptional regulatory protein ZraR from Alteromonas macleodii MIT1002

 Score =  230 bits (586), Expect = 9e-65
 Identities = 126/297 (42%), Positives = 185/297 (62%), Gaps = 9/297 (3%)

Query: 179 LSALHHDHA------EGFDALLGESPAIRTLKARALRVAALDAPLLVHGETGTGKELVAR 232
           LS L H+++       G   ++G S AI+ +  RA ++A  D   L+ GE+GTGKE+ AR
Sbjct: 123 LSKLEHENSILARTRSGMSRIVGNSEAIQKVVRRAEKIANTDISTLLLGESGTGKEVFAR 182

Query: 233 ACHAVSSRHAAPFLALNCAALPESLAESELFGYAPGAFTGAQRGGKPGLMELANQGTVFL 292
           + H  S R   PF+A+NCA++PE+L ESELFGY  GAFTGA +    G +E A  GT+FL
Sbjct: 183 SIHEHSPRKDKPFVAINCASIPENLLESELFGYEKGAFTGANKT-TVGKIETAQGGTLFL 241

Query: 293 DEIGEMSPYLQAKLLRFLSDGSFRRVGGDREVKVDVRIISATHRDLERMVAEGSFREDLF 352
           DEIG+M   LQAK+LRFL +    RVGG  E+ VD+R+I ATHRDL+ MVA+ +FREDL+
Sbjct: 242 DEIGDMPIGLQAKMLRFLQERVIERVGGRNEIPVDIRVICATHRDLQAMVAQETFREDLY 301

Query: 353 YRLNVLNLEVPPLRDRGQDILMLAHFFMQQACTQIQRPACRLTPSTHSALLANPWPGNVR 412
           YR+  + + +PPLR+R QDI++LA  F+     + +  A   + +  +A+LA+ WPGN+R
Sbjct: 302 YRVGEMPIMIPPLRERDQDIILLARTFLNIYREEFKAKAKSFSETAVNAMLAHKWPGNIR 361

Query: 413 QLQNVIFRAAAICEGNLVDIGDLDIAGTSVARGQDGEVASLEQAVGDFERELLQRLY 469
           ++QN +  A  + EG ++   DL +    V    + E  +L +     E   ++R Y
Sbjct: 362 EMQNKLKSAVIMAEGTVIQPDDLGL--MPVDAHDEPETLNLREVREIAESRAIRRAY 416