Pairwise Alignments

Query, 178 a.a., putative RNA polymerase sigma factor from Pseudomonas putida KT2440

Subject, 192 a.a., sigma-70 family RNA polymerase sigma factor from Rhodanobacter sp000427505 FW510-R12

 Score = 55.5 bits (132), Expect = 6e-13
 Identities = 40/137 (29%), Positives = 63/137 (45%), Gaps = 11/137 (8%)

Query: 34  RLSRRPAEIEDMVQDVLLAVHNARHTYQPQQPLTAWVQAIARYKLADHLR----SVSRRD 89
           R+ R P +  ++ QD  L VH   H Y+ +  L +W+  +A      HL+    ++    
Sbjct: 41  RMVRNPEDARELCQDTFLRVHQCLHQYRGESALKSWIGRVAYTIALRHLQHKRIALVEPG 100

Query: 90  ARHDV-----LDDDAQLFAVSEVESAEASRDLTKLLKQLPERQRLPIVHVKLEGLSVEET 144
           A +D      L D   L A      AE +R L   ++ LP  QR  +    LE  ++ E 
Sbjct: 101 ADNDFALVENLGDGFDLEAA--CADAETARHLHAAIEALPPLQRTLLTLYYLEETTIPEI 158

Query: 145 AQLTGLSSSAVKVGIHR 161
           AQ+TGL+S  +K  + R
Sbjct: 159 AQITGLASGTIKSHLFR 175