Pairwise Alignments

Query, 178 a.a., putative RNA polymerase sigma factor from Pseudomonas putida KT2440

Subject, 177 a.a., RNA polymerase sigma factor from Magnetospirillum magneticum AMB-1

 Score = 52.8 bits (125), Expect = 3e-12
 Identities = 40/134 (29%), Positives = 59/134 (44%), Gaps = 5/134 (3%)

Query: 43  EDMVQDVLLAVHNARHTYQPQQPLTAWVQAIARYKLADHLRSVSRRDARHDVLDDDAQLF 102
           ED+VQ+ LL    A+  +  +     W+ AIA   L DH R  + R       +D A L 
Sbjct: 22  EDLVQETLLRAVAAQQAFAGRSRPLTWLSAIALNALRDHFRRPATRREESAAPEDFAGLA 81

Query: 103 -----AVSEVESAEASRDLTKLLKQLPERQRLPIVHVKLEGLSVEETAQLTGLSSSAVKV 157
                AV+ +  AE    +T  L  LP+R R  +V   + G    E A   G++    +V
Sbjct: 82  DQCEDAVTALMKAEMGDCITAHLSALPDRLREVLVLHDMGGAGHAEVAAALGITEGNARV 141

Query: 158 GIHRGLKALSRLIG 171
            +HR   AL   +G
Sbjct: 142 LLHRARAALRERLG 155