Pairwise Alignments

Query, 178 a.a., putative RNA polymerase sigma factor from Pseudomonas putida KT2440

Subject, 191 a.a., RNA polymerase sigma factor RpoE from Erwinia tracheiphila SCR3

 Score = 47.8 bits (112), Expect = 1e-10
 Identities = 37/141 (26%), Positives = 64/141 (45%), Gaps = 11/141 (7%)

Query: 41  EIEDMVQDVLLAVHNARHTYQPQQPLTAWVQAIARYKLADHLRSVSRRDARHDVLDDDAQ 100
           ++ D+VQ+  +  + A  +++       W+  IA     +HL +  RR    DV   DA+
Sbjct: 45  DVPDIVQESFIKAYRALESFRGDSAFYTWLYRIAVNTAKNHLVAQGRRPPLSDVDAIDAE 104

Query: 101 LFA-------VSEVESAEASRDLTKL----LKQLPERQRLPIVHVKLEGLSVEETAQLTG 149
            F        +S  E+   S +L ++    ++ LPE  R+ I   +L+GLS EE A +  
Sbjct: 105 NFESAGGLKEISNPENLMLSEELKQMVFRTIETLPEDLRMAITLRELDGLSYEEIAAIMD 164

Query: 150 LSSSAVKVGIHRGLKALSRLI 170
                V+  I R  +A+   I
Sbjct: 165 CPVGTVRSRIFRAREAIDSKI 185